Aug 2026· Molecular diversity· 0 citations· 44 references
Medicine
TL;DR
Overall, this end-to-end workflow efficiently compresses large libraries into a confirmed micromolar CXCR4 hit while lowering computational and infrastructure barriers for early-stage discovery.
Results indicate that 2D-based docking-score surrogate modeling can provide a reproducible and retrainable strategy for large-scale structure-based virtual screening by concentrating docking resources on a smaller, enriched subset of compounds.
Jongkeun Choi· International Journal of Mol...· 0 citations
Structural investigation of re-docked actives showed that re-ranked poses were more native-like, with improved binding-site occupancy, reduced centroid displacement, and greater recovery of co-crystal interactions.
L. Le, Thanh-An Pham, Ngoc Nguyen Tran et al.· bioRxiv· 0 citations
It is elucidated that HY-18,623 achieves high-affinity binding through persistent hydrogen bonds with hinge residues Val96 (CDK4) and Val101 (CDK6) and Val101 (CDK6) as a promising lead candidate for further therapeutic development in oncology.
Yu-Xin Wang, Lin-Xia Fang, Quan-Fang Liu et al.· Molecular diversity· 0 citations
DeepCGASPred is a cyclic GMP-AMP synthase (cGAS)-specific deep learning scoring function that integrates three-dimensional convolutional neural networks with multi-head attention mechanisms and composite structural descriptors, including Structural Protein–Ligand Interaction Fingerprints (SPLIF), hydrogen bond features...
Muhammad Junaid, Muhammad Zeeshan, Abbas Khan et al.· Discover Chemistry· 0 citations
The convergence of docking, dynamics, and free-energy results prioritized PM2, PM3, and PM4 as promising MAP3K8 hit candidates, which require further experimental validation and lead optimization.
M. Islam, A. Iqbal, M. A. Ali et al.· Molecular diversity· 0 citations
Target-level results showed substantial variability in MCS-containing workflows and limited benefits from adding docking without target-specific optimization, and a validated ligand-based predictor or a simple two-method rank-fusion scheme provided the highest observed mean hit recovery without requiring elaborate inte...
Elisabetta Grazia Tomarchio, Rocco Buccheri, A. Rescifina· International Journal of Mol...· 0 citations
We use cookies to run the site and, with your consent, for analytics and to show ads.
See our Cookie Policy.