Sep 2026· Journal of Chemical Theory and Computation· 1 citation· 63 references
Machine Learning in Materials Science
Abstract
Machine-learned interatomic potentials (MLIPs) have become an increasingly important tool for molecular dynamics (MD) simulations, enabling near quantum-mechanical accuracy at significantly reduced computational cost. Recent studies indicate that the Graph Atomic Cluster Expansion (GRACE) neural network architecture delivers strong performance in materials chemistry. In this work, we assess the GRACE architecture for the prediction of potential energy surfaces for organic molecules and introduce GRACE-OFF (GRACE Organic Force Field). GRACE models of varying depth (one-layer and two-layer) and size (small, medium, large) are trained on the SPICE v2.0 data set. We validate the resulting models using a variety of benchmarks. These include single-point energy and force predictions, torsional energy profiles, condensed phase properties of organic liquids and water (thermodynamic properties, self-diffusion coefficients, radial distribution functions, and temperature-dependent water density), as well as the stability of biomolecular MD simulations for gas-phase Ala15 and solvated crambin. For the single-molecule benchmarks (single point energies and forces, torsional energy profiles), the one-layer models showed only mediocre performance, whereas the two-layer models outperformed the MACE-OFF models to which we compare. For the condensed phase properties, the two-layer models gave consistently better results than the MACE-OFF family of MLIPs. For water and hexane, the GRACE-OFF models also beat the much more expensive small UMA/OMol25 (S) model. The two-layer GRACE-OFF models accurately reproduce experimental water radial distribution functions and predict water densities in close agreement with experimental data over a temperature range from 270 to 330 K. Benchmarks demonstrate that GRACE-OFF achieves higher MD performance than comparable MACE-OFF models in both single and double precision. This establishes GRACE-OFF as an accurate and computationally efficient foundation potential for routine simulations of organic liquids and biomolecular systems.
The results are packaged in the Greenfield Startup Model (GSM), which explains the priority of startups to release the product as quickly as possible, and the need to shorten time-to-market, by speeding up the development through low-precision engineering activities.
Carmine Giardino, Nicolò Paternoster, M. Unterkalmsteiner et al.· IEEE Transactions on Softwar...· 178 citations· ⚡14
Software startup companies develop innovative, software-intensive products within limited timeframes and with few resources, searching for sustainable and scalable business models.
M. Unterkalmsteiner, P. Abrahamsson, Xiaofeng Wang et al.· e-Informatica Software Engin...· 157 citations· ⚡17
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The comparison of adopter and non-adopter sample reveals three potential adoption inhibitor, security, data privacy, and portability, which underlines the importance of the technical and security perspectives for research investigating the adoption of technology.
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Henry Edison, Nina M. Smørsgård, Xiaofeng Wang et al.· Journal of Systems and Softw...· 78 citations· ⚡6
The application of agile software methods and more recently the integration of Lean practices contribute to the trend of continuous improvement in the software industry. One such area warranting proper empirical evidence is a project’s operational efficiency when using the Kanban method. This short paper takes a new angle and explores waste in the Kanban-driven software development project context. A preliminary research model is presented for helping the consequent replication of the study. The results from the empirical analysis suggest Kanban can be an effective method in visualizing and organizing the current work, but does not prevent waste from creeping in, although the overall project outcome may be successful.
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