Tryptophan (Trp) residues are comparatively rare in proteins but are frequently positioned at sites that control folding, molecular recognition, ligand binding, and enzymatic activity. Direct chemical modification of Trp therefore offers a powerful strategy for perturbing protein structure and function. However, methods for installing compact, highly polar functionality onto native Trp residues under mild, protein-compatible conditions remain limited. Here we report a visible-light-driven reductive platform for the C2-selective phosphonylation of Trp-containing peptides and proteins using oxime phosphonates as radical precursors. The reaction proceeds under mild conditions, tolerates diverse peptide sequences containing nearly all proteinogenic amino-acid side chains, and enables late-stage modification of Trp-containing synthetic peptides or peptides derived from structurally complex bioactive molecules. The method further extends to native proteins in aqueous buffer, with LC-MS/MS analysis confirming site-selective modification across a range of protein substrates. Collectively, these results establish photochemical Trp-phosphonylation as a versatile method for peptide diversification, protein conjugation, and chemical control of biomolecular function in situ.
The comparison of adopter and non-adopter sample reveals three potential adoption inhibitor, security, data privacy, and portability, which underlines the importance of the technical and security perspectives for research investigating the adoption of technology.
Nattakarn Phaphoom, Xiaofeng Wang, S. Samuel et al.· Journal of Systems and Softw...· 111 citations· ⚡8
This study investigates how Lean internal startup facilitates software product innovation in large companies and identifies its enablers and inhibitors, and shows the potential of the method-in-action framework to investigate the Lean startup approach in non-startup context.
Henry Edison, Nina M. Smørsgård, Xiaofeng Wang et al.· Journal of Systems and Softw...· 78 citations· ⚡6
This paper highlights the challenges to conduct proper affect-related studies with psychology, provides a comprehensive literature review in affect theory, and proposes guidelines for conducting psychoempirical software engineering.
D. Graziotin, Xiaofeng Wang, P. Abrahamsson· SSE@SIGSOFT FSE· 56 citations· ⚡4
This study conducts a multiple case study on twenty European software startups and proposes a prototype-centric learning model in early stage software startups, and identifies factors that occur as barriers but also facilitators for prototyping in earlystage software startups.
Anh Nguyen-Duc, Xiaofeng Wang, P. Abrahamsson· International Conference on...· 44 citations· ⚡5
It is demonstrated that linker-free PROTACs can outperform traditional designs, marking a paradigm shift in PROTAC development for targeted protein degradation.
Pinal, a 16-billion-parameter foundation model that produces protein candidates from natural-language functional descriptions, supports natural language as a high-level interface for candidate generation in protein design, enabling programmable exploration with reduced reliance on manually specified structural or seque...
A new machine-learning framework aims to improve the success rate of computational protein design while moving away from results that reproduce sequences found in nature.