This paper evaluates training-free vision language model (VLM) localization on two datasets representing same-section high-correspondence and adjacent-section low-correspondence imaging and tests unconstrained and metadata-constrained search and VLMs with geometric controls, classical template matching, and two alternative training-free approaches.
Abstract
Registering images acquired with different microscopy modalities is essential for relating complementary measurements of the same specimen. In correlative X-ray fluorescence (XRF) and optical microscopy, the XRF map often covers only a small region of an optical image acquired from the same or an adjacent tissue section. Field-of-view (FOV) localization is necessary but can be difficult when appearance and structure differ across modalities. Here we evaluate training-free vision language model (VLM) localization on two datasets representing same-section high-correspondence and adjacent-section low-correspondence imaging. We test unconstrained and metadata-constrained search and compare VLMs with geometric controls, classical template matching, and two alternative training-free approaches (DINOv2 and multiGradICON). Direct VLM prompting produced content-dependent spatial signals but was not reliable alone. Classical matching was most accurate when cross-modal structure was preserved but failed in the low-correspondence collection. A proposal-and-verify workflow used repeated VLM predictions as candidates and image-based similarity to select the final location. This workflow recovered useful localization in the low-correspondence regime.
X-ray fluorescence (XRF) microscopy maps elemental distributions, while optical microscopy can provide complementary morphological context. Localizing XRF fields of view (FOVs) in optical images is difficult because the two modalities differ in contrast mechanism and resolution. Most current workflows place each XRF ti...
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X-ray computed tomography (CT) is one of today’s most critical imaging modalities, with a wide range of applications spanning from medical diagnosis to industrial inspection. CT images can be severely affected by physically induced degradations such as low-dose noise and beam hardening, which compromise image quality a...
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Gaining understanding of process-structure-property relationships in materials at a mechanistic level relies on correlative microscopy workflows. These workflows, in turn, fundamentally depend on image matching, i.e., a computer vision task with the objective of finding point correspondences in pairs of images. Mat...
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This survey provides the first bi-modality review covering both laboratory and synchrotron biomedical μCT segmentation, consolidates recent segmentation methodologies, identifies major trends in deep-learning techniques, and highlights current limitations across SR-PCI-μCT.
Mr3D-VL is a dedicated visual-language foundation model for multi-parametric 3D MRI, with 4 billion parameters, that employs an unsupervised pre-trained shared 3D encoder and 4D rotational positional embedding for dual modality-spatial integration.
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Microsoft Research Blog· microsoft.comOct 12, 2026
StudentSim is a research system for evaluating and improving AI tutoring tools before they are tested with learners. It models how individuals may engage with tutors, giving feedback to improve tutor performance across subjects like chess, writing, and mathematics. The post Simulating student learning for better AI tutoring appeared first on Microsoft Research.