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protein folding

1,912 papers

#protein folding Open access Sep 2026

BI-TfR1 CapX rapidly transits the blood-brain barrier for efficient, low-dose gene delivery throughout the CNS

Safe, efficient gene delivery throughout the CNS remains a central obstacle to treating genetic diseases of the brain and spinal cord. We describe BI-TfR1 CapX, a human transferrin receptor (TfR1)-binding AAV capsid that, after a low intravenous dose in adult humanized TFRC mice, transduced more than 80% of cortical an...

Ken Y. Chan, Chin-Yen Lin, Qin Huang et al. · 0 citations
#protein folding Open access Sep 2026

Protein folding as a configurational reconstruction: Bio-epistemic application of the General Epistemic Dispersion Theory to adult human hemoglobin

This repository includes a theoretical extension of the General Epistemic Dispersion Theory (GEDT) formalism to the domain of molecular biology, using adult human hemoglobin (HbA) as a case study. The manuscript proposes a bio-epistemic mapping in which the acquisition of the three-dimensional configuration is analyzed...

Massimo Comitato · 0 citations
#protein folding Open access Sep 2026

E8 Phi-Lattice as Quantum Consciousness Coupler — E8 Intelligence Research

Using the 240 E8 root vectors as a dynamic phase‑modulation scaffold, we demonstrate that phi‑coupled 132 Hz inputs can generate a self‑synchronizing attractor field that links quantum superposition lifetimes to neural oscillation phases. This field produces a stable interference pattern that simultaneously modulates p...

Andrew Stewart Caldin · 0 citations
#protein folding Dataset Open access Sep 2026

Uncertainty-aware benchmarking reveals ambiguous transcripts in mRNA–lncRNA classification

Zenodo data README This dataset contains data files and experimental results associated with the manuscript "Uncertainty-aware benchmarking reveals ambiguous transcripts in mRNA–lncRNA classification". Related Code Repository: https://github.com/cbib/uncertainty_aware_lnclassifier Data Archive DOI: 10.5281/zenodo.19551...

Daniel García‐Ruano, Mikaël Georges, Saswat K. Mohanty et al. · 0 citations
#protein folding Open access Sep 2026

Bioinformatics Explained: Data, Genomics & Computational Biology Systems

This academic curriculum module delivers an analytical, biophysical, and computational exposition of bioinformatics, computational genomics, sequence alignment algorithms, structural biology, and high-throughput multi-omics data integration. Key Technical Topics & Curricular Areas Covered:1. Genomic Data Acquisition &...

Prep4Uni.Online · 0 citations
#protein folding Open access Sep 2026

Bioinformatics Explained: Data, Genomics & Computational Biology Systems

This academic curriculum module delivers an analytical, biophysical, and computational exposition of bioinformatics, computational genomics, sequence alignment algorithms, structural biology, and high-throughput multi-omics data integration. Key Technical Topics & Curricular Areas Covered:1. Genomic Data Acquisition &...

Prep4Uni.Online · 0 citations
#protein folding Open access Sep 2026

Three correctable biases inflate estimates of structural novelty from predicted-structure databases

Motivation. Predicted-structure databases have made it routine to ask what fraction of a proteome adopts a fold with no known relative. Reported novelty rates vary widely between studies, and it is unclear how much of that variation is biological rather than methodological. A novelty call is a negative result, so it in...

Khan Osman · 0 citations
#protein folding Dataset Open access Sep 2026

Structural model of PP2A-B55α holoenzyme in complex with Parkin Ubl domain

Structural models of the quaternary complex comprising the heterotrimeric PP2A holoenzyme and the phosphorylated Parkin Ubl domain were generated using AlphaFold3. The modeled protein assembly included the catalytic subunit Cα (PP2Ac, Uniprot: P67775), the scaffolding subunit PR65A (residues 1–589, Uniprot: P30153), th...

Chun Tang, Fuxiang Liang, Lingsen Meng · 0 citations
#protein folding Dataset Open access Sep 2026

Differential analysis of pulmonary smooth muscle cells vs aortic smooth muscle cells

This dataset provides paired transcriptomic (RNA-seq) and proteomic profiling of vascular smooth muscle cells (VSMCs) from pulmonary artery and aorta under hypertensive and normotensive conditions in rats, aiming to identify tissue-specific molecular responses to hypertension. Four groups (n=3 each): NPA (normal pulmon...

yuwen Dai · 0 citations
#protein folding Open access Sep 2026

THE ENIGMA OF LIPID AND PROTEIN SPECIALIZATION: FROM CHAOS TO INFORMATION: Redefinition of All Membrane Constituents as Phase Oscillators in the V3 Framework

This work redefines the cell membrane beyond the classical fluid mosaic model into a coherent biophotonic network. Every membrane constituent—including lipids (PC, PE, PS, PI, SM, cholesterol), integral and peripheral proteins, ion channels, pumps, receptors, HLA molecules, glycocalyx, cytoskeleton, lipid rafts, and ex...

outail benhadid · 0 citations
#protein folding Open access Sep 2026

Structural Alignment and Interaction Mapping of Fibrosis Associated Proteins: An Advanced Bioinformatics Study

This study investigates the impact of social media on the development of communicative compensation strategies among Lung fibrosis, particularly idiopathic pulmonary fibrosis (IPF), involves chronic, progressive scarring of lung tissue driven by dysregulated extracellular matrix (ECM) remodelling and persistent fibrobl...

Sakshi Soni, Ruchi Yadav · 0 citations
#protein folding Open access Sep 2026

Design, Synthesis, and Evaluation of Novel Cephalotaxine-Cinnamic Acid Derivatives Against Hepatocellular Carcinoma

Cephalotaxine (1) is a parent compound within the cephalotaxine alkaloids class mainly derived from Cephalotaxus plants. In this study, by coupling 1 with cinnamic acid, 17 novel cephalotaxine-cinnamic acid derivatives (S1–S17) were designed and synthesized to enhance their anti-tumor efficacy. Among them, S10 showed t...

Wenxing Li, Yiming Qian, Hao Wang et al. · 0 citations

From tech blogs

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Google DeepMind Blog Sep 30, 2026

Introducing SynthID Bio

Proof of concept for watermarking AI-generated proteins while preserving biological function.

MIT News · Artificial Intelligence Aug 27, 2026

Looking beyond natural sequences

A new machine-learning framework aims to improve the success rate of computational protein design while moving away from results that reproduce sequences found in nature.

Google DeepMind Blog Nov 25, 2025

AlphaFold: Five years of impact

Explore how AlphaFold has accelerated science and fueled a global wave of biological discovery.

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