Improvements enabling quantification of site-specific modifications, including post-translational modifications and covalent compound-protein interactions spanning diverse pathways are described.
Steven R. Shuken, Geordon A. Frere, Charlotte R. Beard et al.· Nature Communications· 0 citations
Amyloid fibrils are implicated in a myriad of human diseases. A striking observation is that fibrils extracted from diseased tissues are characterized by a restricted set of folds unique to the specific pathology. In contrast, fibrils grown in vitro exhibit extensive structural diversity, suggesting that specific envir...
Mikołaj I Kuska, Łucja Kozicka, S. Prodhan et al.· bioRxiv· 0 citations
Findings identify pose ranking, rather than pose generation, as the major limitation of current cyclic peptide–protein complex prediction and demonstrate that complementary structural features can improve confidence-based pose selection.
Zhe Li, Ye Yuan, Kai-Qiang Hu et al.· bioRxiv· 0 citations
This work introduces BEAM, a multiscale framework that learns slow collective variables from coarse-grained simulations to guide all-atom enhanced sampling to explain how vectorial secretion accelerates pertactin folding by excluding an off-pathway kinetic trap.
Lan Yang, Qing Luan, Michael C. Baxa et al.· bioRxiv· 0 citations
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This work identified the key molecular determinant in the hHv1 channel that mediates cholesterol inhibition and also provided a mechanism linking the conversion between demosterol and cholesterol by DHCR24 to pH homeostasis in many cells, such as phagocytes, cardiomyocytes, neurons and microglial cells.
Shuo Han, R. Duan, Sarah Applewhite et al.· bioRxiv· 0 citations
This work proves that ancient proteins can be reliably recovered from highly degraded palaeogenomic material, establishing a new computational avenue for evolutionary and biochemical research.
Louis Kraft, Peter Wad Sackett, Gabriel Renaud· bioRxiv· 0 citations
Peripheral blood mtDNA-CN is independently associated with cardiac diastolic function in hospitalized older adults, with a more pronounced association in frail individuals.
Guochao Li, Li Qin, Tingting Huang et al.· Experimental Gerontology· 0 citations
Results suggest that CRB-701 may be a promising alternative therapeutic for the treatment of nectin-4 expressing tumors, providing a more favorable therapeutic window and potentially enabling regimens with higher doses and less frequent dosing than are required for EV, the only currently approved nectin-4 targeting ADC...
Zhao-Peng Sun, Mo Dan, Lu Lv et al.· Cancer Research Communicatio...· 0 citations
EvoMax is established as an integrated strategy for engineering compact eukaryotic Fz2 genome editors and FanzMAX v3-hLa is identified as a high-efficiency programmable nuclease for mammalian genome editing.
Shijie Wan, J. Gold, Pranay Vure et al.· Nature Biotechnology· 1 citation
The LSN-based mild solubilization and chromatographic purification process developed in this study successfully circumvents the destructive effects and complex refolding steps associated with conventional strong denaturants, and the prepared recombinant His-VP1 protein possesses the potential to serve as a high-quality...
Lei Fan, Jianpeng Liang, Jieshan Lin et al.· Sheng wu gong cheng xue bao...· 0 citations
Photodynamic inactivation (PDI) offers a green, non-thermal and sustainable strategy for controlling foodborne pathogens and spoilage microorganisms in animal-derived foods, and natural products are increasingly being explored as photosensitizers. Here, we identify the previously underexplored photodynamic antibacteria...
Lin Yang, Kai-Yuan Su, Zhuo-Ran Guo et al.· Food Research International· 0 citations
HRP/Eo crosslinking method is identified as a favorable strategy for engineering dECM particle–THA hydrogels for cartilage regeneration and improved mechanical performance and chondrocyte redifferentiation effect compared to SPS/Ru, attributed to the difference in hydrogel morphology.
Jiang-Yao Xu, Jacek K. Wychowaniec, M. D’Este et al.· RSC Advances· 0 citations
A new machine-learning framework aims to improve the success rate of computational protein design while moving away from results that reproduce sequences found in nature.