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protein folding

2,054 papers

#protein folding Open access Jan 2026

CDKN3, PKP2, ADM, MS4A1, FAM83A, and DKK1 Define a Posttranslational Modification (PTM)–Associated Prognostic Model for Lung Adenocarcinoma

The PTM‐related six‐gene model showed potential for prognostic stratification and characterization of immune‐related features in LUAD and demonstrated that the low‐risk group may be more likely to benefit from immunotherapy.

Zhi Liu, Gang Li, Ling Lin · 0 citations
#protein folding Open access Aug 2026

AI‐Assisted Tumor Boundary Delineation via Targeted Ultrasmall Iron Oxide Nanoprobe for High‐Contrast HER2‐Positive Tumor Imaging

A strategic platform that combines a novel ultrasensitive magnetic resonance (MR) contrast agent with deep learning to significantly enhance the tumor‐to‐normal ratio (TNR) and enabled the reconstruction of three‐dimensional tumor models, offering clinicians an intuitive visualization of tumor structure for precise dia...

Jiaying Zheng, Yi Zhu, Xin-Rui Li et al. · 0 citations
#protein folding Open access Aug 2026

Paired plaque and plasma proteomics reveal molecular signatures of symptomatic atherosclerosis

Deep proteomic profiling of human carotid plaques identifies molecular signatures of symptomatic atherosclerosis that extend beyond conventional histopathology, which implicate neutrophil activation and inflammatory signaling pathways as key determinants of plaque vulnerability.

L. Zhang, L. Živković, A. Ray et al. · 0 citations
#protein folding Open access Aug 2026

1H, 15N and 13C backbone and side-chain resonance assignments of Amblyomin-X Kunitz domain

The 1H, 13C, and 15N resonance assignments of the Amblyomin-X Kunitz domain obtained by multidimensional NMR spectroscopy provide the first detailed NMR characterization of the Amblyomin-X Kunitz domain l.

Vitor S. Almeida, Virginnia C. Nogueira, L. S. O. Conti et al. · 0 citations
#protein folding Open access Aug 2026

PyMOL plugin for Protein Circuit Topology

A protein CT analysis plugin for PyMOL v3.6.1 with a graphical user interface (GUI), automatic installation, and novel features developed through integration with PyMOL’s application programming interface (API).

Matīss Dimiņš, Alexander Bazba, Ádám Mogyorósi et al. · 0 citations
#protein folding Open access Aug 2026

Prediction of Prion Proteins in E. coli Based on Bimodal Sequence Characteristics.

This study enhances the understanding of the E. coli-genome nature and suggests the existence of specific and experimentally testable novel prions in this organism, and moves a step forward towards the identification of new prion proteins in bacteria.

Katherine Shreeve, Jinoh Jang, Mr. S Srivathsan et al. · 0 citations
#protein folding Review Open access Aug 2026

Toward Rational Design of Precision-Fermented Milk Proteins: Integrating Cross-Species Selection, Post-Translational Modification, and AI Optimization.

Milk proteins deliver nutritional, functional, and bioactive properties that alternative protein sources cannot adequately replicate, yet conventional livestock-based production faces compounding constraints of scalability, resource intensity, and sustainability. Precision fermentation offers a structurally distinct so...

Zhengtao Guo, Kun Ye, Zhen-Ye Shi et al. · 0 citations
#protein folding Preprint Aug 2026

Scalable quantum simulation of continuous-time generative models via tensor networks

The first numerical study of continuous-time flow and diffusion models is presented, in which time-dependent potentials and states are represented as tensor networks, and a coherent amplitude encoding is prepared that can be post-processed by quantum algorithms offering a quadratic advantage over Monte Carlo sampling.

Nathan X. Kodama, L. Wray, S. Cochran et al. · 0 citations
#protein folding Aug 2026

A Repurposed S-Adenosyl-l-Methionine Synthetase Mediates Cytidyl-Cyclitol Natural Product Assembly.

Nucleoside natural products exhibit diverse chemical architectures and potent biological activities, yet the biosynthetic strategies that generate their structural diversity remain incompletely understood. Here, we elucidate the early stage biosynthetic pathway of the cytidyl-cyclitol natural product K-563 and its deri...

Zhong-Tian Yu, Wen-He Zhang, Richiro Ushimaru et al. · 0 citations
#protein folding Aug 2026

OA01.4. Multimodal Early Warning System for Postoperative Complications After Esophagectomy: Integrating Patient-Reported Outcomes, Laboratory Trajectories, and Clinical Text Mining

A multimodal early warning system integrating PROs, laboratory trajectories, and large language model-extracted clinical text features to enable real-time, automated complication surveillance substantially outperforms single-modality approaches for detecting postoperative complications after esophagectomy.

Si-miao Lu, Yi Zhu, Yong-tao Han et al. · 0 citations
#protein folding Open access Aug 2026

P1.106. Proteomic Signatures of Chemoresistance in Oesophageal Adenocarcinoma Cell Models

Quantitative proteomic profiling of acquired chemoresistant oesophageal adenocarcinoma cell models identifies broad adaptive changes with both heterogeneous and recurrent components, and suggests a platinum-class component supported by overlap between oxaliplatin- and carboplatin-resistant models.

Zuzanna Trybala, Giulia Costella, Tomas Henek et al. · 0 citations
#protein folding Open access Aug 2026

P1.069. Distinct Postoperative CRP Trajectory Patterns and Their Association With Complication Severity Following Esophagectomy

Postoperative CRP trajectory patterns are significantly associated with complication severity after esophagectomy, and the High-Persistent trajectory identifies a high-risk subgroup, and the D3/D1 ratio enables early risk stratification by POD 3.

Si-miao Lu, Yi Zhu, Yong-tao Han et al. · 0 citations

From tech blogs

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Google DeepMind Blog Sep 30, 2026

Introducing SynthID Bio

Proof of concept for watermarking AI-generated proteins while preserving biological function.

MIT News · Artificial Intelligence Aug 27, 2026

Looking beyond natural sequences

A new machine-learning framework aims to improve the success rate of computational protein design while moving away from results that reproduce sequences found in nature.

Google DeepMind Blog Nov 25, 2025

AlphaFold: Five years of impact

Explore how AlphaFold has accelerated science and fueled a global wave of biological discovery.

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