Skip to content
#protein folding Open access

Incremental value of biophysical and biochemical first trimester markers for predicting early and late preeclampsia: a nested model analysis

Sep 2026 · Obstetrics Gynecology and Reproduction · 0 citations · 23 references
Pregnancy and preeclampsia studies

Abstract

Aim : to compare the discriminative ability and calibration of nested-architecture machine learning (ML) models and the Fetal Medicine Foundation (FMF) algorithm for predicting early-onset (< 34 weeks) and late-onset (≥ 34 weeks) preeclampsia (PE) in the first trimester of pregnancy in Russian population. Materials and Methods. with 23,247 singleton pregnancies was carried out. The biophysical sample comprised 22,230 observations, and the biochemical subsample included 7,581 observations. Nested ML models were developed: M0 (maternal characteristics) → M2 [(M0 + biophysical markers – mean arterial pressure (MAP) and uterine artery pulsatility index (UtAPI)] → M4 (M2 + biochemical markers – placental growth factor (PlGF), soluble fms-like tyrosine kinase-1 (sFlt-1) and pregnancy-associated plasma protein-A (PAPP-A)]. A comparison was made with the FMF algorithms – prior FMF risk (FMF prior) and posterior FMF risk (FMF posterior). Metrics included: AUC-ROC (Area Under the Receiver Operating Characteristic curve) with 95 % confidence interval (CI) calculated by the bootstrap method (n = 2000); the observed-to-expected ratio (O:E ratio); incremental value of biomarkers – change in C-statistic (ΔC), net reclassification improvement (NRI), integrated discrimination improvement (IDI), and sensitivity at fixed false-positive rates. Statistical significance of AUC differences was assessed using the DeLong test. Results. The AUC of model M4 for early-onset PE (EOPE) was 0.972 (95 % CI = 0.947–0.991) compared with 0.951 for FMF posterior (p = 0.368); for late-onset PE (LOPE), the AUC was 0.871 (95 % CI = 0.833–0.906) versus 0.822 for FMF posterior (p = 0.009). After Platt scaling recalibration, the ML models demonstrated adequate calibration (O:E ≈ 1.0). FMF posterior demonstrates inadequate calibration for LOPE in the Russian population (O:E = 3.34; 95 % CI = 2.61–4.21), indicating 3.34-fold more LOPE cases than predicted by the model. Biophysical markers provided 4-fold greater incremental value for EOPE (ΔC = +0.029 vs. +0.007), while biochemical markers were more valuable for LOPE (ΔC = +0.020 vs. +0.001). For EOPE the UtAPI was a lead predictor (odds ratio (OR) = 3.28; 95 % CI = 2.68–4.70), for LOPE – previous PE (OR = 1.90; 95 % CI = 1.72–2.09). Conclusion . ML models significantly outperform the FMF algorithm in discriminating late preeclampsia and provide substantially better calibration in Russian population. The inadequacy of the FMF algorithm for LOPE (O:E = 3.34 indicates 3.3-fold more LOPE cases than predicted) justifies the need for specialized models for this phenotype. Differential incremental value of biomarkers was established: biophysical markers (UtAPI) are critical for EOPE, biochemical markers (PlGF, sFlt-1) – for LOPE, supporting the concept of contingent screening.

Read PDF

Similar papers

#computer vision Review Open access May 2015

A survey study on major technical barriers affecting the decision to adopt cloud services

The comparison of adopter and non-adopter sample reveals three potential adoption inhibitor, security, data privacy, and portability, which underlines the importance of the technical and security perspectives for research investigating the adoption of technology.

Nattakarn Phaphoom, Xiaofeng Wang, S. Samuel et al. · 111 citations · ⚡8
#computer vision Open access Feb 2018

Lean Internal Startups for Software Product Innovation in Large Companies: Enablers and Inhibitors

This study investigates how Lean internal startup facilitates software product innovation in large companies and identifies its enablers and inhibitors, and shows the potential of the method-in-action framework to investigate the Lean startup approach in non-startup context.

Henry Edison, Nina M. Smørsgård, Xiaofeng Wang et al. · 78 citations · ⚡6
#computer vision Book Open access Jul 2015

Understanding the affect of developers: theoretical background and guidelines for psychoempirical software engineering

This paper highlights the challenges to conduct proper affect-related studies with psychology, provides a comprehensive literature review in affect theory, and proposes guidelines for conducting psychoempirical software engineering.

D. Graziotin, Xiaofeng Wang, P. Abrahamsson · 56 citations · ⚡4
#machine learning Open access May 2017

What Influences the Speed of Prototyping? An Empirical Investigation of Twenty Software Startups

This study conducts a multiple case study on twenty European software startups and proposes a prototype-centric learning model in early stage software startups, and identifies factors that occur as barriers but also facilitators for prototyping in earlystage software startups.

Anh Nguyen-Duc, Xiaofeng Wang, P. Abrahamsson · 44 citations · ⚡5
#protein folding Open access Sep 2026

Programmable design of functional proteins from natural language

Pinal, a 16-billion-parameter foundation model that produces protein candidates from natural-language functional descriptions, supports natural language as a high-level interface for candidate generation in protein design, enabling programmable exploration with reduced reliance on manually specified structural or sequence constraints.

Fengyuan Dai, Shiyang You, Yudian Zhu et al. · 31 citations · ⚡3

Related blog posts

MIT News · Artificial Intelligence Aug 27, 2026

Looking beyond natural sequences

A new machine-learning framework aims to improve the success rate of computational protein design while moving away from results that reproduce sequences found in nature.

Google DeepMind Blog Nov 25, 2025

AlphaFold: Five years of impact

Explore how AlphaFold has accelerated science and fueled a global wave of biological discovery.

We use cookies to run the site and, with your consent, for analytics and to show ads. See our Cookie Policy.