Optical tweezers using metal nanostructures have leveraged extreme subwavelength focusing to circumvent the diffraction limit, enabling the isolation and label-free sensing of single nanoparticles. Over the past two decades, nanoaperture optical tweezers (NOTs) have matured into a useful tool for biophysical analysis, monitoring the conformational dynamics, binding affinities, and structural mutations of single proteins without perturbing labels or tethers. Driven by a post-machine-learning shift in biophysics toward understanding the sequence-structure-dynamics-function paradigm, NOTs have recently achieved real-time mapping of single-protein energy landscapes. Future improvements will aim to resolve the sub-microsecond protein folding dynamics by improving the signal-to-noise ratio while navigating the impacts of surface interactions and thermophoresis. This work forecasts key technical innovations over the next five years to achieve nanosecond-scale temporal resolution. By transitioning to smaller metal nanostructures (which includes moving away from nanoapertures) and operating at longer near-infrared wavelengths, near-field sensitivity can be maximized while mitigating laser-induced heating. Augmented functionalities—including integrated Raman spectroscopy (for applications like peptide identification and single-cell proteomics), and enantioselective chiral trapping will expand the utility of metal nanostructure optical tweezers. Combined with machine learning models to maximize data extraction from low signal-to-noise environments and train future predictive models on protein dynamics, these advances aim to deliver a robust platform to understand the dynamics of biomolecules.
The comparison of adopter and non-adopter sample reveals three potential adoption inhibitor, security, data privacy, and portability, which underlines the importance of the technical and security perspectives for research investigating the adoption of technology.
Nattakarn Phaphoom, Xiaofeng Wang, S. Samuel et al.· Journal of Systems and Softw...· 111 citations· ⚡8
This study investigates how Lean internal startup facilitates software product innovation in large companies and identifies its enablers and inhibitors, and shows the potential of the method-in-action framework to investigate the Lean startup approach in non-startup context.
Henry Edison, Nina M. Smørsgård, Xiaofeng Wang et al.· Journal of Systems and Softw...· 78 citations· ⚡6
This paper highlights the challenges to conduct proper affect-related studies with psychology, provides a comprehensive literature review in affect theory, and proposes guidelines for conducting psychoempirical software engineering.
D. Graziotin, Xiaofeng Wang, P. Abrahamsson· SSE@SIGSOFT FSE· 56 citations· ⚡4
This study conducts a multiple case study on twenty European software startups and proposes a prototype-centric learning model in early stage software startups, and identifies factors that occur as barriers but also facilitators for prototyping in earlystage software startups.
Anh Nguyen-Duc, Xiaofeng Wang, P. Abrahamsson· International Conference on...· 44 citations· ⚡5
It is demonstrated that linker-free PROTACs can outperform traditional designs, marking a paradigm shift in PROTAC development for targeted protein degradation.
Pinal, a 16-billion-parameter foundation model that produces protein candidates from natural-language functional descriptions, supports natural language as a high-level interface for candidate generation in protein design, enabling programmable exploration with reduced reliance on manually specified structural or sequence constraints.
A new machine-learning framework aims to improve the success rate of computational protein design while moving away from results that reproduce sequences found in nature.