Oct 2026· Philosophical transactions of the Royal Society of London. Series B, Biological sciences· Vol 381· 0 citations· 132 references
Medicine
Abstract
Abstract Protein disulphide formation between cysteine residues impacts protein folding and function, yet the context in which it occurs often determines whether it is beneficial or detrimental. To ensure proper disulphide status, organisms have evolved compartment-specific disulphide maintenance systems. Some of these, like the thioredoxin and glutaredoxin systems, promote disulphide reduction in oxidized substrates, whereas others, like the protein disulphide isomerase, Mia40 and Dsb systems, primarily oversee proper structural disulphide formation within client proteins. Here, I review how these disulphide maintenance systems operate and explore how they fit within the proteostasis network. Each system functions in helping proteins achieve and/or retain their functional states. Along these lines, thioredoxins can prevent aggregation of some proteins and, working with holdases, regulate recovery from protein misfolding during oxidative stress. Separately, protein disulphide isomerases work collaboratively with core molecular chaperones (e.g. Hsp70 family members) to aid in protein folding, enabling the correct formation of structural disulphides in clients. In addition, some disulphide maintenance enzymes influence protein degradation of improperly folded proteins by the proteasome. This review highlights several key ways that protein disulphide maintenance and proteostasis go hand-in-hand. This article is part of the Theo Murphy meeting issue ‘ProteostaSys: a systems view of proteostasis’.
The comparison of adopter and non-adopter sample reveals three potential adoption inhibitor, security, data privacy, and portability, which underlines the importance of the technical and security perspectives for research investigating the adoption of technology.
Nattakarn Phaphoom, Xiaofeng Wang, S. Samuel et al.· Journal of Systems and Softw...· 111 citations· ⚡8
This study investigates how Lean internal startup facilitates software product innovation in large companies and identifies its enablers and inhibitors, and shows the potential of the method-in-action framework to investigate the Lean startup approach in non-startup context.
Henry Edison, Nina M. Smørsgård, Xiaofeng Wang et al.· Journal of Systems and Softw...· 78 citations· ⚡6
This paper highlights the challenges to conduct proper affect-related studies with psychology, provides a comprehensive literature review in affect theory, and proposes guidelines for conducting psychoempirical software engineering.
D. Graziotin, Xiaofeng Wang, P. Abrahamsson· SSE@SIGSOFT FSE· 56 citations· ⚡4
This study conducts a multiple case study on twenty European software startups and proposes a prototype-centric learning model in early stage software startups, and identifies factors that occur as barriers but also facilitators for prototyping in earlystage software startups.
Anh Nguyen-Duc, Xiaofeng Wang, P. Abrahamsson· International Conference on...· 44 citations· ⚡5
It is demonstrated that linker-free PROTACs can outperform traditional designs, marking a paradigm shift in PROTAC development for targeted protein degradation.
Pinal, a 16-billion-parameter foundation model that produces protein candidates from natural-language functional descriptions, supports natural language as a high-level interface for candidate generation in protein design, enabling programmable exploration with reduced reliance on manually specified structural or seque...
A new machine-learning framework aims to improve the success rate of computational protein design while moving away from results that reproduce sequences found in nature.