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protein folding

1,977 papers

#protein folding Open access Sep 2026

Effects of the Pattern of Light and a Dark Recovery Period on Photosynthesis and Growth in Synechocystis sp. PCC 6803

Optimizing the application of light is a central challenge in the cultivation of cyanobacteria because light is needed for growth, but excessive light can cause cellular damage. Here, we demonstrate that the temporal pattern of the light intensity, rather than the time-integrated daily total, determines photosynthetic...

Hyun-Jin Lim, Yeong-Jun Lee, Min-Sung Kim et al. · 0 citations
#protein folding Dataset Open access Sep 2026

Tryptophan oxidation-induced dynamics highlight why stable γS-crystallin variants aggregate

Human γS-crystallin is a highly soluble protein found in the eye lens, where it is densely packed with other proteins to form the refractive tissue required for vision. Mutations in γS can compromise its solubility and cause congenital cataract, while post-translational modifications (PTMs) can lead to age-related cata...

Yeonseong Seo · 0 citations
#protein folding Open access Sep 2026

Computational Design and Experimental Validation of Photoactive PARP1 Inhibitors

Abstract Light-activated drugs are a promising way to treat localized diseases for which existing treatments have severe side effects. However, their development is complicated by the set of photophysical and biological properties that must be simultaneously optimized. Here we used computational techniques to find a se...

Simon Axelrod, Miroslav Kašpar, Kristýna Jelínková et al. · 0 citations
#protein folding Open access Sep 2026

Connectivity-Aware Geometric Descriptors for Catalytic Site Alignment Across Non-Homologous Proteins

Motivation: Enzymes with unrelated folds can share identical catalytic mechanisms through convergent evolution, yet aligning known catalytic sites across non-homologous proteins remains challenging. General-purpose structural aligners optimize global backbone similarity and sacrifice local catalytic geometry, while ded...

Nicholas Harkiolakis · 0 citations
#protein folding Sep 2026

Mechanistic insight into the mechanical stability of anammox granular sludge: Roles of polarity, structure and function of extracellular proteins.

Findings advance the mechanistic understanding of exoprotein-mediated stabilization in anammox granules and provide valuable implications for optimizing the performance of anammox systems.

Shufei He, Bo-Lan Zhou, Xing Huang et al. · 0 citations
#protein folding Sep 2026

Self-Assembled Aptamer-Derived PROTAC Enables Efficient Cellular Internalization for Intracellular Sclerostin Degradation and Triple-Negative Breast Cancer Therapy.

Comprising an aptamer for protein of interest (POI) recognition, a linker, and an E3 ligand, aptamer-derived PROTAC enables precise intracellular POI degradation via ubiquitin-proteasome system. Due to hydrophilic polyanionic backbone, their efficacy was fundamentally constrained by inefficient cellular internalization...

Hang Luo, Ze-Feng Chen, Yu-Fei Pan et al. · 0 citations
#protein folding Open access Sep 2026

Multifunctional Zinc Glycyrrhizinate‐Integrated Gel for Enhanced Probiotic Delivery and Alleviation of Acute and Spontaneous Colitis

In both dextran sulfate sodium‐induced colitis and IL‐10‐deficient spontaneous colitis mouse models, L. reuteri@ZGM persistently scavenged ROS, effectively reduced pro‐inflammatory cytokine levels, restored the expression of tight junction‐associated proteins and intestinal barrier function, enhanced probiotic coloniza...

Meng-Yun Peng, Xiao-Chun Chen, Wei Li et al. · 0 citations
#protein folding Open access Sep 2026

Mechanism of Isonitrilase, a Nonheme Iron Decarboxylase Involved in the Biosynthesis of the Isonitrile Group in Peptides: A Computational Study.

Surprisingly, there are quite a few natural products that contain an isonitrile substituent as these groups enhance the activity and function of the natural product. Various enzymes in nature are involved in the biosynthesis of an isonitrile group in biomolecules. Thus, the mycobacterial Rv0097 isonitrilase reacts the...

Cheng-Xu Zhu, S. D. de Visser · 0 citations
#protein folding Open access Sep 2026

In silico analysis of MALAT1 and H19 lncRNA interactions with the diabetes-related proteins ASK1 and YAP1

A hypothesis-generating in silico approach provides a framework for experimental validation of lncRNA-mediated regulation in diabetes-related signalling pathways by identifying structurally plausible RNA–protein interaction interfaces that overlap with known regulatory hotspots in YAP1.

Leonardo-Elías Cabrera-Nájera, O. N. Rodríguez-Peña, C. Flores-Ortiz et al. · 0 citations

From tech blogs

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Google DeepMind Blog Sep 30, 2026

Introducing SynthID Bio

Proof of concept for watermarking AI-generated proteins while preserving biological function.

MIT News · Artificial Intelligence Aug 27, 2026

Looking beyond natural sequences

A new machine-learning framework aims to improve the success rate of computational protein design while moving away from results that reproduce sequences found in nature.

Google DeepMind Blog Nov 25, 2025

AlphaFold: Five years of impact

Explore how AlphaFold has accelerated science and fueled a global wave of biological discovery.

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