Author

Ningyi Zhang

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#gene editing Open access Sep 2026

variant-fm-benchmark: evidence strength of splice-region variant effect predictors against saturation genome editing functional assays

variant-fm-benchmark 3.0.0: code, data and every output of the study "Evidence strength of splice-region variant effect predictors assessed against saturation genome editing data in seven cancer susceptibility genes" (N. Zhang), with one command that rebuilds every output from public sources and checks it against the a...

Ningyi Zhang · Zenodo (CERN European Organi... · 0 citations

#gene editing Open access Sep 2026

variant-fm-benchmark: evidence strength of splice-region variant effect predictors against saturation genome editing functional assays

variant-fm-benchmark 3.0.1: code, data and every output of the study "Evidence strength of splice-region variant effect predictors assessed against saturation genome editing data in seven cancer susceptibility genes" (N. Zhang), with one command that rebuilds every output from public sources and checks it against the a...

Ningyi Zhang · Zenodo (CERN European Organi... · 0 citations

#large language models Open access Sep 2026

functional-standard-atlas: attenuation-corrected, territory-resolved benchmarking of variant effect predictors against saturation genome editing

functional-standard-atlas: attenuation-corrected, territory-resolved benchmarking of variant effect predictors against saturation genome editing Software and frozen data underlying the manuscript "Measurement reliability bounds functional benchmarks and relocates where variant effect prediction fails" (N. Zhang). WHAT...

Ningyi Zhang · 3 citations