The utility of ex vivo glioblastoma characterization is demonstrated, allowing decoding of tumor heterogeneity and clinical prognostication as well as providing a framework for deconvoluting the complex cancer phenotype.
Abstract
Glioblastoma’s pronounced migratory capacity underlies its diffuse invasion, presenting a formidable barrier to successful treatment. Ex vivo characterization of glioblastoma cells isolated from freshly resected clinical samples under physiologically relevant conditions revealed two distinct migratory phenotypes, Fast-Migrating (FM) and Slow-Migrating (SM). These phenotypes reflect distinct mechanosensitivity profiles and are associated with pharmacological responses that support the motor–clutch model of cell migration. Analysis of genes associated with these phenotypes revealed a transcriptomic signature that closely associated with in vitro cell migration, histological invasion in patient specimens, and clinical survival. Single-nucleus RNA sequencing revealed that FM and SM cells coexist within a single glioblastoma, with FM cells enriched at the periphery and SM cells localized to the tumor core. Collectively, our study demonstrates the utility of ex vivo glioblastoma characterization, allowing decoding of tumor heterogeneity and clinical prognostication as well as providing a framework for deconvoluting the complex cancer phenotype.
BACKGROUND
Glioblastoma (GBM) is an aggressive brain tumor and an unmet clinical need due to its invasiveness and therapy resistance. These features are driven by glioblastoma stem-like cells (GSLCs), which exhibit remarkable functional heterogeneity. While transcriptional profiling has helped define this heterogeneity...
C. Barelli, M. Bonfanti, F. Mirabella et al.· Neuro-Oncology· 0 citations
The surgical margin is the primary site of glioblastoma recurrence, yet its molecular features remain poorly characterized. We performed histology-guided sampling and single-cell spatial transcriptomics of surgical margin and adjacent recurrent tumor regions, with matched primary tumors from 40 patients. The surgical m...
S. Artzi, D. Harwood, A. Locallo et al.· Cancer Discovery· 0 citations
It is shown that metastasis-to-metastasis seeding is the dominant pattern of cancer spread and that increased polyclonal migration predicts poor prognosis, and that post-mortem cell-free DNA captures genomic and transcriptional heterogeneity of the subtypes, which provides a potential strategy for noninvasive assessmen...
P. Itagi, Samantha L. Schuster, Sonali Arora et al.· Nature· 0 citations
An integrated overview of organotypic slice models derived from mouse, rat, and human tissue, with a focus on their application in studying glioblastoma invasion, tumor–microenvironment interactions, and therapeutic response is provided.
A. Bondar, Susanne Raulefs, Jette Wrana et al.· Frontiers in Oncology· 0 citations
BACKGROUND
Glioblastoma (GBM) is a highly aggressive brain tumor for which cell-free DNA (cfDNA) has shown promise as a minimally invasive biomarker, yet the biological processes governing cfDNA release and composition in GBM remain incompletely understood.
METHODS
We investigated cfDNA release dynamics, fragmentatio...
Sharvari Mankame, Angad Beniwal, M. Dufault et al.· Neuro-Oncology· 0 citations
A mesenchymal gene-expression program linked to inflammation and tissue remodeling was consistently associated with higher tumor grade and shorter survival, and within tumor tissue it was clearly organized in space.
Kesavi HimaBindhu Vuyyuru, Vyshnavi Daggubati, A. P. Karlapudi et al.· Biology· 0 citations
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