Aug 2026· Reviews in Aquaculture· 0 citations· 83 references
TL;DR
This review synthesises the current state of genomic and transcriptomic resources available for spiny and slipper lobsters (Achelata), contextualising these within the broader decapod framework and proposing future directions integrating genomics, transcriptomics, and functional tools to accelerate sustainable domestication and genetic improvement of lobsters.
Abstract
The rapid advancement of high‐throughput sequencing technologies has transformed aquaculture genomics, enabling unprecedented insights into the biology and improvement of non‐model aquatic species. Among crustaceans, lobsters represent one of the most commercially valuable yet genomically underexplored taxa. This review synthesises the current state of genomic and transcriptomic resources available for spiny and slipper lobsters (Achelata), contextualising these within the broader decapod framework. We outline key genomic assemblies, transcriptomic atlases, and molecular tools that underpin emerging research on reproduction, nutrition, growth, stress tolerance, and disease resistance. We further highlight how omics‐driven approaches—spanning whole‐genome sequencing, SNP discovery, RNA interference, and nutrigenomics—are reshaping opportunities for selective breeding, reproductive control, and feed optimisation. Recent progress in establishing closed‐cycle aquaculture of
Panulirus ornatus
now provides the foundation for applying these molecular resources to address key production bottlenecks, including larval duration, cannibalism, and asynchronous moulting. We propose future directions integrating genomics, transcriptomics, and functional tools to accelerate sustainable domestication and genetic improvement of lobsters. Together, these advances mark a pivotal shift toward genomically informed spiny lobster aquaculture.
This review surveyed tropical plant species with published whole-genome assemblies and categorized them based on the primary aims of their genomic investigations, illustrating how integrative, multi-dimensional genomic datasets have provided robust insights into tropical plant evolution, adaptation, and trait biology.
This review synthesizes the concepts, methodological advances, computational tools, and recent progress in plant pan-genomics, with a focused emphasis on tropical and subtropical fruit crops.
Anupama Roy, Sarika, M. Iquebal· Journal of the Indian Societ...· 0 citations
Discussion from a structured expert workshop held at the 2025 Aotearoa Aquatic Diseases Symposium in Dunedin, New Zealand, where experts explored the challenges and opportunities for adopting high‐throughput sequencing (HTS) to support disease investigations in aquaculture is synthesised.
F. Samsing, P. Arbon, Matthew Arnold et al.· Reviews in Aquaculture· 0 citations
This review outlines foundational applications of omics in aquaculture and highlights the characteristics and current applications of distinct omics approaches, and summarizes three core application domains of omics in aquaculture.
Chao Guo, De-Qi Sun, Ben Yang et al.· Fishes· 1 citation
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