It is shown that cellulosomal principles can operate in highly reduced cohesin‐dockerin systems, and two additional candidate interacting partners for ClcC appear to bind via a non‐canonical interface.
Abstract
Cellulosomes are efficient enzymatic nanomachines which have arisen for the degradation of cellulosic biomass. They are found abundantly in soil‐dwelling microbes and bacteria which thrive in the stomachs of ruminant mammals. Two protein domains, cohesins and dockerins, characterise cellulosomes. These domains interact with each other to form, in many cases, enormous complexes with as many as 160 individual proteins. However, genome annotation of Cellulosilyticum lentocellum DSM 5427 revealed a single cohesin domain (encoded by Clole_2599) and a single dockerin domain (Clole_2598). Therefore, we recombinantly expressed ClcC and ClcD and found they form a (predicted ~ 104 kDa) heterodimeric complex. We show that this complex formation enhances cellulase activity approximately 2‐fold on insoluble microcrystalline cellulose and 1.25‐fold on soluble carboxymethyl cellulose. Moreover, we identified two additional candidate interacting partners for ClcC, one of which appears to bind via a non‐canonical interface. These findings suggest that cellulosomal principles can operate in highly reduced cohesin‐dockerin systems.
It is shown that extensive sequence divergence obscures the detection of many ruminococcal cellulosomes by conventional sequence homology-based methods, and that cellulosomes are far more widespread and structurally diverse in human-associated Ruminococcus species than previously appreciated.
Christine M. Minor, Allen Takayesu, M. Arbing et al.· bioRxiv· 0 citations
TcChi is a thermostable, multifunctional biocatalyst capable of degrading chitin, chitosan, cellulose, and β-1,3-glucan from a single protein scaffold, making it a promising candidate for consolidated biomass deconstruction and waste valorization.
Alex Windels, S. Dhaene, Tom Desmet· Biotechnology for Biofuels a...· 0 citations
Surprisingly, the periplasmic cellulase BcsZ, encoded in the cellulose biosynthesis operon, is necessary for efficient bacterial cellulose production and functions independently of the biosynthetic complex to clear mislocalized pEtN cellulose from the periplasm.
J. Rum, Jhih-Yi Huang, E. Kitova et al.· bioRxiv· 0 citations
It is shown that GeoA cargo loading is mediated by repeating, short cargo loading peptides (CLPs), and that GeoA encapsulation provides benefits for enzyme activity and stability, and provides insights into a putative mode of cargo protein regulation via pore state modulation.
A. Fazal, Cassandra A. Dutcher, Michael P. Andreas et al.· bioRxiv· 0 citations
This review frames cellulosome engineering as a process-aware macromolecular assembly problem, in which catalytic balance, substrate targeting, assembly size, inter-domain spacing, and environmental robustness must be optimized together.
Menglan Liao, Zi-Xuan Wan, Long-Qing Wang et al.· International Journal of Bio...· 0 citations
A new class of fungal biosurfactant proteins is introduced and a simplified downstream process based on methanol/chloroform extraction is developed, reducing costs while preserving functionality.
Rossana Pitocchi, Giulia Fichera, P. Cicatiello et al.· International Journal of Bio...· 0 citations
A new machine-learning framework aims to improve the success rate of computational protein design while moving away from results that reproduce sequences found in nature.