Author

Shengbo Wu

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#graph neural networks Open access Oct 2026

Discovery of dietary polyphenols targeting the autoinducer-2 quorum sensing system of pathogenic bacteria.

Targeting autoinducer-2 (AI-2) quorum sensing (QS) systems with dietary compounds represents a promising strategy to combat pathogens, yet mechanisms remain elusive. Here, we develop a machine learning-driven framework combining computational screening with multi-level experimental analysis to identify AI-2 quorum sens...

Sheng-Bo Wu, Peng Zhang, Man-Man Wang et al. · Gut microbes · 0 citations

Open access Jul 2026

Machine Learning Gap-Fills Missing Transporter Kinetics in Biosystems Across Scales

The first compound-protein interaction machine learning model of transporter Vmax and Km, MMTKPred is developed, which captures the effects of point mutations and substrate changes on transporters and effectively models metabolite transport spanning from molecular to multi- species scales.

Sizhe Qiu, Zhangyu Guo, Weiming Tu et al. · bioRxiv · 0 citations