Pankhuri Singhal

ARCHER-LD: Rapid Long-Range Linkage Disequilibrium Calculations at Biobank Scale using GPU Acceleration

Linkage disequilibrium (LD) information from one’s own dataset is considered optimal for downstream analyses such as statistical fine-mapping. However, the computational complexity ( computations for N variants) lead most studies to use external reference panels, such as from 1000 Genomes. To capture LD across all vari...

Culture-independent 16S rRNA gene-based profiling of bacterial communities in the Badrinath and Tapovan geothermal springs of the Garhwal Himalaya, India

ETHOS: Towards a Modular Ethics Framework for Clinical Multi-Agent Systems

ETHOS (Ethics and Trust through Hierarchical Oversight System), a modular ethics framework designed as a governance meta-agent that can be integrated with any existing multi-agent system without requiring changes to its underlying architecture, is presented.

Development of RT-RPA assays for rapid detection of mango-infecting viruses using high-throughput sequencing-derived genomic information.

The developed RT-RPA assays provide a practical tool for routine virus surveillance, certification of virus-free planting material, thereby contributing to improved stress resilience and sustainable mango production.

Host resistance and susceptibility to tomato leaf curl New Delhi virus: molecular mechanisms, genetic resources, and strategies for durable control

This review summarizes the current knowledge on taxonomy, genome organization, epidemiology, transmission biology, host range, and molecular interactions of ToLCNDV with host plants and vectors and discusses recent advances in genomics, transcriptomics, proteomics, gene editing, and molecular breeding.