Aug 2026· Biochemical and Biophysical Research Communications - BBRC· Vol 834, pp.
154505
· 0 citations· 57 references
Medicine
TL;DR
It is shown that KPNA1 localizes to the nucleolus in neuronal tissues and is associated with box C/D small nucleolar ribonucleoprotein (snoRNP)-related components, including DDX21, NOP58, NOP56, and fibrillarin, and these associations were largely preserved after nuclease treatment.
Abstract
KPNA1 (karyopherin α1, also known as importin α5) is a well-characterized nuclear transport factor; however, its functions beyond canonical nuclear transport remain incompletely understood. Here, we show that KPNA1 localizes to the nucleolus in neuronal tissues and is associated with box C/D small nucleolar ribonucleoprotein (snoRNP)-related components, including DDX21, NOP58, NOP56, and fibrillarin (FBL). These associations were largely preserved after nuclease treatment. Loss of KPNA1 is associated with changes in box C/D snoRNA levels. Live-cell imaging and domain-specific analyses of KPNA1 indicate that the importin β1-binding domain contributes to nucleolar localization, whereas the C-terminal region influences nucleolar dynamics. Notably, the schizophrenia-associated KPNA1E448X mutation exhibits aberrant nucleolar accumulation and reduced association with snoRNP-related components. Collectively, these findings provide evidence for a previously unrecognized association between KPNA1 and box C/D snoRNP complexes, thereby extending the functional repertoire of KPNA1 beyond its canonical role in nuclear transport.
Processing bodies (P-bodies) are cytoplasmic, non-membrane-bound structures involved in mRNA decay. EDC4 serves as a key scaffold for the decapping complex within P-bodies. Here, we demonstrate that N4BP1 interacts with EDC4, as well as with DCP1A, DCP2, and XRN1 - key components of 5′-cap hydrolysis. Endogenous N4BP1...
P. Piłat, Ankur Garg, Udo Heinemann et al.· Communications Biology· 0 citations
Simple Summary Cells experience physical cues from their environment, which influence gene expression through mechanotransduction. We previously found that Ubiquitin-conjugating enzyme E2 A/B (UBE2A/B) move into the nucleus under stiff or low-density conditions, promoting histone H2B (H2B) monoubiquitination and cell g...
Using a combination of biochemical assays, structural modeling and molecular dynamics, it is shown that TTC33 directly recruits WDR61 and PHF5A to assemble into a trimeric core complex (TANC), which then forms distinct interactions with either UNG1/2 or SF3B–CCDC97.
R. Tomecki, Małgorzata Drabko, Małgorzata Siek et al.· Nature Communications· 0 citations
Histone lysine demethylases are mainly known as transcriptional regulators for their demethylase activity, but catalysis-independent functions are increasingly recognized. This work focuses on lysine-specific demethylase 5B (KDM5B), targeting H3K4me3. The canonical functional isoform is PLU-1. A catalytically inactive...
Valeria Manzini, Elena Di Nisio, Alessandro Piana et al.· International Journal of Mol...· 0 citations
The results identify an in vivo silencing role of a Nup93 paralog and suggest that Nup93-2 may form a unique NE-associated complex that targets a subset of Polycomb domains containing growth-promoting genes.
Matthew L. O'Sullivan, Johannes Hartmann, Mark F. Mclellan et al.· bioRxiv· 0 citations
The nucleolus is a membraneless nuclear organelle formed by liquid-liquid phase separation and serves as the hub for ribosomal RNA (rRNA) transcription and ribosome assembly. Here, we identify ALKBH3, a Fe(II)/α-ketoglutarate-dependent dioxygenase, as a previously unrecognized nucleolar protein that colocalizes with th...
Xixi Ma, Yuliang Huang, Hao Jin et al.· Journal of Molecular Cell Bi...· 0 citations
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