Aug 2026· Journal of Chemical Theory and Computation· Vol 22 17, pp.
9076-9086
· 1 citation· 79 references
Medicine
Abstract
Covalent organic frameworks (COFs) are highly ordered, porous organic materials whose reticular construction from tailored nodes and linkers enables atomic-level control over structure and function. The design space of COFs is vast with virtually unlimited combinations of nodes, linkers, and functional groups. Interpretable machine learning (ML) offers a pathway to navigate this complexity by identifying the structural features that govern materials performance, yet interpretability often comes at the cost of predictive accuracy. In this work, we introduce a novel multiple-kernel learning framework that achieves both accuracy and mechanistic insight. A multiple-kernel ridge regression (MKRR) model was trained on band gaps predicted from GFN1-xTB level theory for a data set of 232 theoretical pyranoazacoronene (PAC) COFs produced from eight different conjugated linkers and 29 functional groups. Modifying these building units alone produced a range of band gaps between 0.4-2 eV. Manual analysis of the theoretical band gaps versus the linker indicates that breaking the conjugation pathway by altering the bond angle or by introducing a σ-bond increases the band gap while increasing the length of the linker decreases the band gap. All functional groups appear to reduce the band gap with three specific electron withdrawing groups reducing the band gap near 0.4 eV. For the ML, the building units were represented with three independent kernels that encoded the local environments of each node, linker, and functional group calculated from the Smooth Overlap of Atomic Positions (SOAP). After decomposing each kernel's contribution to the model's global predictions, we found that the MKRR model successfully captures the underlying structure-property relationships that influence the band gap. These results demonstrate that MKRR is an effective and interpretable framework for understanding and designing functional COFs.
A semiempirical extended tight-binding approach (GFN1-xTB) is employed to compute the electronic properties of a dataset of MOFs, and it is shown that GFN1-xTB approximates MOF band gaps well, as compared to semilocal DFT.
A. Jose, A. Walsh· Journal of Chemical Theory a...· 0 citations
A data-driven framework combining explainable machine learning (ML) with large-scale virtual library generation with large-scale virtual library generation is presented, establishing a practical route from experimental data to actionable catalyst designs.
Xuefeng Li, Haoke Qiu, Hanwen Pei et al.· Journal of Physical Chemistr...· 0 citations
The SBMR-CNN model demonstrates highly competitive accuracy, outperforming the CM, Uni-Mol+, and MPNN-2D benchmarks, while closely approaching the performance of the more computationally intensive MPNN-3D and SOAP descriptors, as well as the RF-MF model.
Abdulaziz W. Alherz, C. Tezak, Mohammed S. Alhajeri· Industrial & Engineering...· 0 citations
Metal-organic frameworks (MOFs) and MOF-like porous materials exhibit vast structural diversity and support critical applications in gas storage, separations, and catalysis. Predictive modeling remains difficult because their structure-property relationships are multiscale and cage-like, governed by both local chemical...
We introduce the orbital cluster expansion (OCE), a linear regression on physics-motivated local features derived from atomic orbital eigenenergies, and benchmark it against the SPICE 2.0 biomolecular data set at the ωB97M-D3BJ/def2-TZVPPD level. With regression of formation energies on 677 dipeptides spanning the natu...
D. L. Azevedo· Journal of Physical Chemistr...· 0 citations
Coupled-cluster theory defines the accuracy standard for molecular electronic-structure properties but scales too steeply for routine application, whereas density-functional theory is affordable yet systematically biased. We resolve this trade-off with a single equivariant network, HARP (Hamiltonian Read-out for Proper...
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