Jul 2026· Chemical Science· Vol 17, pp. 15580 - 15594· 0 citations· 48 references
Medicine
Abstract
Proton-coupled electron transfer (PCET) mediated by hydroquinone and related molecules is key to natural and artificial energy conversion. The reactivity of these molecules depends on their bond dissociation free energy (BDFE), but studying the relationship between structure and thermochemistry across this chemical space has been limited by challenging experimental setup and high computational expense. Here, we present the first use of the AIMNet2 neural network potential to calculate average BDFE (BDFEavg) values for the 2H+/2e− dehydrogenation of about 200 000 hydroquinone-like compounds, including vicinal diamines, diols, and dithiols. Benchmarking against DFT calculations for 168 substituted ortho-phenylenediamines (opda) shows good agreement (R2 ∼ 0.84). Our analysis finds that the BDFEavg of diamines ranges from 50 to 80 kcal mol−1 and can be systematically tuned by modifying the backbone and N-substitution: electron-withdrawing groups raise BDFEavg by up to 15 kcal mol−1, while lower aromaticity in furan and thiophene backbones decreases BDFEavg by approximately 10 kcal mol−1 compared to the phenyl systems (∼65 kcal mol−1). Validation through cyclic voltammetry and reactivity studies with quinone oxidants for selected compounds supports the computational results. This extensive thermochemical database and a web-based prediction tool developed as a result of this work will offer valuable resources for designing PCET reagents for catalysis, energy storage, and biomedical uses.
Using a combination of path-integral molecular dynamics and machine-learning techniques, we investigate the structure, energetics, and proton-transfer isomerizations in small Rydberg complexes of the form [NH4][NH3]n (n = 1, 2), at temperatures near T = 50 K. In both clusters, the unpaired negative charge resides predo...
D. Hunt, D. Laria· Journal of Chemical Physics· 0 citations
The complex structural effects of metal ion binding in glycans remain a topic of significant scientific interest. In this study, we implement a machine learning-driven workflow utilizing SchNet-based neural network potentials (NNPs) to efficiently map the conformational space of neutral and metalated N-acetylhexosamine...
K. K. S. Custodio, Temma Yazawa, Huu Trong Phan et al.· Physical Chemistry, Chemical...· 0 citations
We provide design principles for predicting bond exchange kinetics in acylsemicarbazide (ASC)-based systems that can be applied to tuning the properties of dynamic networks. Because of their capability of dynamic and reversible bond dissociation, ASCs are promising motifs in the design of tunable dynamic covalent netwo...
Siebe Lekanne Deprez, Stefan J D Maessen, A. V. van Dam et al.· Chemistry· 0 citations
ABSTRACT This study examines the structural stability of CoFe2O4 and the energetics of Langmuir–Hinshelwood recombinative desorption of two pre-adsorbed hydrogen atoms on the CoFe2O4 (111) surface, relevant to high-temperature thermochemical hydrogen production. A pretrained universal M3GNet graph neural-network potent...
R. Arifin, Y. Winardi, I. Widaningrum et al.· Molecular Simulation· 0 citations
This work describes the growth of a proton-transfer single crystal, 2-aminopyridinium dihydrogen phosphate (2APDHP), using the slow solvent evaporation technique and confirmed that the crystal belongs to the monoclinic system.
G. Sivaraj, N. Jayamani, T. M. Viswanathan et al.· Asian Journal of Chemistry· 0 citations
This study investigates the formation and properties of three proton-transfer complexes: piperidine-picric acid (PIP–PA), piperidine-7,7,8,8-tetracyanoquinodimethane (PIP–TCNQ), and morpholine-picric acid (MOR–PA). Utilizing piperidine and morpholine as electron donors, picric acid (PA) and 7,7,8,8-tetracyanoquinodimet...
M. Refat, R. de Farias, Nada A. Adam et al.· Bulletin of the Chemical Soc...· 0 citations
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