Aug 2026· Journal of Physical Chemistry A· Vol 130, pp. 6825 - 6834· 0 citations· 65 references
Medicine
Abstract
Fluorinated molecules, including per- and polyfluoroalkyl substances (PFAS), present persistent challenges for thermochemical characterization due to limited experimental data, strong carbon–fluorine bonding, and the rapidly expanding size and diversity of fluorinated chemical space. While density functional theory (DFT) calculations can provide useful thermochemical data for individual fluorinated species, their routine application becomes increasingly impractical as molecular size, conformational complexity, and the number of distinct PFAS compounds continue to grow. Existing Benson-type group additivity schemes provide limited resolution for fluorinated environments, restricting their applicability to modern fluorinated and PFAS-relevant systems. Here, we develop a chemically resolved group additivity (GA) framework for fluorinated and PFAS-relevant species by fragmenting DFT-derived thermochemistry for 3070 molecules. This approach expands the available fluorinated Benson-type group library from 14 to 159 local environments and integrates the resulting groups within the Python Group Additivity (pGrAdd) framework. 10-fold cross-validated regression against DFT data yields root-mean-square deviations (RMSDs) of 8.14 kcal·mol–1 for enthalpy and 10.05 cal·mol–1·K–1 for entropy, which are reduced to 2.55 kcal·mol–1 and 6.36 cal·mol–1·K–1, respectively, following application of independently defined nongroup interaction correction terms in pGrAdd. Comparison with available experimental thermochemical data shows improved agreement and reduced bias compared to legacy Benson group libraries. This expanded fluorinated GA framework enables scalable and chemically interpretable thermochemical predictions for fluorinated and PFAS-relevant species, supporting kinetic modeling and mechanistic studies where direct electronic structure calculations are feasible but not scalable.
Stimulated by the renewed interest and recent developments in semiempirical quantum chemical (SQC) methods for noncovalent interactions, we examine the properties of liquid water under ambient conditions by means of molecular dynamics (MD) simulations, both with the conventional neglect of diatomic differential overlap...
Xin Wu, Hossam Elgabarty, Vahideh Alizadeh et al.· Journal of Chemical Physics· 1 citation
Methylaluminoxane (MAO) is the most widely used cocatalyst for olefin polymerization, yet its molecular structure remains incompletely understood. Computational methods are essential for elucidating the structure and reactivity of MAO, but their accuracy has been difficult to assess. Benchmarking based on trimethylalum...
A cheminformatics-guided physicochemical assessment of 3-bromo-N-tert-butylbenzene-1-sulfonamide (BTBS) was performed, proposing BTBS as a candidate scaffold for follow-up experimental validation at the interface of electronic-material chemistry and medicinal chemoinformatics.
Reliable density functional theory (DFT) methods for thermally driven cyclization reactions remain insufficiently established, particularly for systems in which proton transfer, conformational preorganization, and weak environmental effects jointly shape the energy landscape. Here, we present a systematic benchmark of...
J. Gutiérrez-Flores, E. H. Huerta, Javier Serrano Medina et al.· ACS Omega· 0 citations
Co-contaminants can alter per- and polyfluoroalkyl substance (PFAS) mobility by modifying aqueous association, phase transfer, and retention by aquifer solids, yet how protonated amines influence these processes remains poorly constrained. Here, we investigated interactions between diisopropylamine (DIPA) and two perfl...
Nour Kashlan, M. Al‐Abdul‐Wahid, E. Pensini· Journal of Contaminant Hydro...· 0 citations
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