This study provides the first multigene-based confirmation of the association of A. alternata with apple leaf and fruit lesions in southeastern Kazakhstan and demonstrates cultivar-dependent differences in susceptibility to this pathogen.
Abstract
Apple (Malus domestica Borkh.) production is increasingly threatened by fungal diseases under conditions of intensive horticulture and ongoing climate change. In southeastern Kazakhstan, symptoms associated with Alternaria spp. have become more frequent in commercial orchards; however, molecularly confirmed data on the pathogen associated with these symptoms remain limited. This study aimed to identify, using multigene molecular phylogenetic analysis, an Alternaria isolate obtained from infected apple leaves and fruits, to confirm its pathogenicity experimentally, and to compare the susceptibility of apple cultivars to this pathogen. For molecular identification, nucleotide sequences of four genetic markers—the ITS region of rDNA, SSU, tef1-α, and RPB2—were obtained by PCR and sequencing. The sequences were compared with reference data from the GenBank database using BLASTn, and phylogenetic relationships were inferred using the maximum likelihood method based on a concatenated dataset of the four loci. The isolate KZ17 clustered within the A. alternata clade, with the broader node uniting this group with A. gossypina and A. longipes receiving a bootstrap value of 78%. A total of 20 fungal isolates were obtained from 112 symptomatic apple leaf and fruit samples. Among them, one representative isolate, KZ17, was selected for multilocus molecular identification and pathogenicity testing. The pathogenicity of isolate KZ17 was confirmed in inoculation experiments on apple microshoots under controlled conditions. Artificial inoculation of detached leaves and ripe fruits of 14 apple cultivars revealed significant cultivar-dependent differences in susceptibility. Lesion diameters ranged from 12.3 ± 0.20 to 19.2 ± 0.35 mm on detached leaves and from 15.0 ± 1.2 to 30.0 ± 2.4 mm on ripe fruits. The least susceptible cultivars were ‘Granny Smith’, ‘Zaman’, and ‘Maksat’, whereas ‘Voskhod’, ‘Saltanat’, and ‘Kamila’ showed the greatest susceptibility. These differences were statistically significant (p < 0.001). This study provides the first multigene-based confirmation of the association of A. alternata with apple leaf and fruit lesions in southeastern Kazakhstan and demonstrates cultivar-dependent differences in susceptibility to this pathogen. These findings contribute to improved pathogen diagnostics, germplasm screening for resistance, and the development of plant protection strategies for commercial apple orchards.
The study highlights the substantial spatial, morphological and molecular variability present in A. porri populations associated with onion purple blotch in Tamil Nadu and provides valuable baseline information for disease surveillance, resistance screening and the development of effective management strategies.
M. Sagarika, K. Kalpana, S. Ramasamy et al.· Plant Science Today· 0 citations
Findings establish F. solani as a causal agent of durian stem rot in Hainan and highlight the potential of Bacillus-based biological control as a sustainable strategy for disease management in durian production systems.
Apple (Malus domestica Borkh.) represents a major fruit crop of global economic importance. Despite its widespread cultivation, fungal diseases infecting branches and vegetative tissues continue to be a major concern, adversely affecting orchard productivity and compromising fruit quality. The present study investigated the fungal pathogen associated with branch canker symptoms observed in apple orchards located in the Al-Jabal Al-Akhdar region, Libya. Symptomatic branch samples exhibiting bark cracking, canker formation, and progressive dieback were collected and subjected to fungal isolation under laboratory conditions. Isolates were purified on potato dextrose agar (PDA) medium and identified according to morphological and microscopic characteristics using standard taxonomic keys. Pathogenicity assays were conducted on healthy apple seedlings to verify the causal relationship between the isolated fungus and disease development. Morphological observations demonstrated that the recovered isolate belonged to Alternaria alternata (Fr.) Keissl., characterized by dark olivaceous to brown colonies and multicellular conidia arranged singly or in short chains. Conidial dimensions ranged from 14.05–14.38 µm in length and 8.07–9.81 µm in width, with 2–8 transverse septa. Artificial inoculation induced typical symptoms, including bark necrosis, branch canker formation, chlorotic lesions, and progressive tissue collapse. Re-isolation from infected tissues successfully fulfilled Koch’s postulates. The findings confirm the pathogenic role of A. alternata in apple branch canker development under local environmental conditions. This study represents one of the first detailed reports concerning the occurrence and pathogenicity of A. alternata associated with apple branch canker in eastern Libya and provides baseline information for future epidemiological and disease management studies
Unknown authors· AlQalam journal of medical a...· 0 citations
Alternaria leaf
blight (ALB), caused by the
Alternaria
species complex, is an economic threat to mustard cultivation all over the world. In this study, 700 infected leaf samples were collected from 28 blocks across six districts of the Bundelkhand region, Uttar Pradesh, India. To assess the prevalence and distribution of
Alternaria
species, 28 representative isolates were selected for further study. Morphological traits separated the majority of the Alternaria isolates into three morphotypes corresponding to
A. brassicae
,
A
.
brassicicola
, and
A
.
alternata
, which cause leaf blight. The pathogenicity test revealed that 18 isolates were highly virulent, 6 isolates were moderately virulent, and 4 were less virulent. Molecular analyses of the 18 highly virulent isolates, based on the internal transcribed spacer (ITS) region and the Alternaria-specific
Alt a1 marker
, confirmed the presence of
A. brassicae
(6 isolates),
A. brassicicola
(3 isolates), and
A. alternata
(9 isolates) in the region. Haplotype network analysis of concatenated ITS and Alt a1 sequences revealed two haplotypes among the
A. alternata
isolates and one haplotype each among the A
. brassicae
and
A. brassicicola
isolates. Additionally, all virulent A
. alternata
isolates carried the polyketide synthase genes (
pksH
and
pksJ
), indicating their genetic potential for Alternaria toxin biosynthesis. The predominance of
A
.
alternata
in mustard crops and the presence of toxin-biosynthesis-associated genes may pose a threat to edible oil production and safety, thereby raising serious concerns and warranting further investigation of toxin production. These findings highlighted the need for targeted resistance strategies against the prevalent
Alternaria
species in the region.
Unknown authors· Frontiers in Plant Science· 0 citations
The presence of abnormally shaped colonies through a multi-faceted approach that included pathogenesis tests and ITS-rDNA sequencing to provide accurate identification of gray mold in strawberries (Botrytis cinerea) supports the feasibility of integrated management approaches that combine biological, phytochemical, and conventional fungicides for controlling gray mold in strawberries.
Ahmed R. Alsharmani, Ali Marzooq Salman, Hawraa Razzaq Dhaher ALaboudi et al.· International Journal of Env...· 0 citations
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