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Zhi-Yuan Yuan

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Oct 2026

Towards scalable cancer prognosis by aligning semi-supervised learning with survival modeling.

Prognostic assessment via whole-slide images (WSIs) is a key task in computational pathology. However, the development of robust predictive models is often bottlenecked by the scarcity of survival-annotated data, given the longitudinal nature of clinical follow-up. Despite its potential, semi-supervised learning (SSL)...

Yi Huang, Ling-Han Cai, Zi-Liang Feng et al. · 0 citations
Open access Sep 2026

Deciphering the gene-centric spatial dynamics across tissue and time with GeneSPOT

Spatial omics technologies provide unprecedented opportunities to investigate how molecular programs are organized within tissues. However, existing analytical frameworks primarily focus on identifying cellular states and characterizing differentially expressed molecular features across these states. The relational spa...

Qi Zou, Zhi-Kang Wang, Si-Jie Li et al. · 0 citations
Open access Sep 2026

Nrsn1–Smarcc1 Coupling Regulates Neural Stem Cell Differentiation and Chronic‐phase Recovery After Ischemic Stroke

ABSTRACT Stroke remains a leading cause of long‐term neurological disability worldwide, largely due to irreversible neuronal loss and the limited regenerative capacity of the adult mammalian brain. Neural stem cells (NSCs) in the adult brain possess the potential to generate new neurons after injury, yet the molecular...

Ruo-Lin Zhang, Chang Liu, Yu-Neng Zhou et al. · 0 citations
Aug 2026

The Multimodal Pretraining Framework CarHE Predicts Spatial Transcriptomics in Tumors from Routine Pathology Images.

CarHE (contrastive alignment of gene expression for hematoxylin and eosin images), a multimodal pretraining framework that infers high-dimensional spatial transcriptomic profiles from routine H&E-stained slides, provides a cost-effective and scalable framework for H&E-based spatial inference, supporting further validat...

Jiawei Zou, Kai Xiao, Ze-Xi Chen et al. · 0 citations

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