MsaTM-DB: a large-scale empirical database linking alignment properties, substitution models, and gene-tree metrics in phylogenomics
MsaTM-DB is presented, a curated database comprising 965,545 loci from 420 eukaryotic phylogenomic studies, each annotated with 35 features spanning alignment properties, substitution parameters, and gene tree metrics that enable systematic investigation of heterogeneity in phylogenetic signals across diverse evolution...