Author

Yunqing Liu

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Preprint Aug 2026

Unlocking Multimodal Protein Language Models at Inference Time

A three-stage investigation framework is established to empirically study the inference design space of multimodal pLMs across three representative pLMs and four fundamental tasks, and to derive conclusions about base models that differ from prior consensus.

Yi Zhou, Qiping Wang, Yunqing Liu et al. · 0 citations

Open access Nov 2024

MolReFlect: Toward In-Context Fine-Grained Alignments Between Molecules and Texts

MolReFlect is proposed, a novel teacher-student framework, where a teacher LLM first generates and refines mappings between caption phrases and SMILES substructures and then explicitly teaches these detailed alignments to a student LLM, enabling LLMs to significantly outperform previous baselines.

Jiatong Li, Yunqing Liu, Wei Liu et al. · IEEE Transactions on Knowled... · 13 citations