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Yuanqi Du

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#machine learning Open access Apr 2025

FEAT: Free energy Estimators with Adaptive Transport

A novel framework for free energy estimation that leverages learned transports implemented via stochastic interpolants and provides consistent, minimum-variance estimators based on escorted Jarzynski equality and controlled Crooks theorem, alongside variational upper and lower bounds on free energy differences.

Jiajun He, Yuan-Qi Du, Francisco Vargas et al. · 23 citations · ⚡1
Preprint Aug 2026

JANUS: A Multi-modal Foundation Neural Sampler for Disordered Materials

JANUS is a multimodal neural sampler that couples continuous and masked discrete diffusion through an equivariant graph neural network trained directly from energy evaluations, without pre-generated equilibrium data, providing a foundation for thermodynamic sampling, characterization and inverse design of chemically di...

Denis Blessing, Mou-Yang Cheng, M. Schebek et al. · 2 citations
#machine learning Preprint Jul 2026

ATLAS: A Foundation Neural Sampler for Amorphous Materials

LATAS, an efficient sampler that learns a diffusion process to generate Boltzmann-distributed amorphous structures directly from a target energy function, is introduced, establishing ATLAS as a foundation model for sampling, steering and designing amorphous materials.

Mouyang Cheng, Denis Blessing, Botao Yu et al. · 1 citation

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