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Yiqun T. Chen

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Review Open access Sep 2026

Reproducible study identification and selection in systematic reviews: barriers and paths forward

Abstract Systematic reviews are foundational to evidence-based practice, but the reproducibility and auditability of study identification and selection remain persistent challenges. Existing reporting standards, such as Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) 2020 and PRISMA-Search e...

Li-Feng Lin, Xing Xing, Chong Wu et al. · 0 citations
Open access Jul 2026

Beyond Expression Prediction: Benchmarking Differential Expression Classification in Single-Cell Perturbation Models

This work systematically evaluates a diverse set of deep learning and non-deep-learning methods for their ability to predict differential expression outcomes under two generalization regimes: unseen perturbations within the same cell line, and unseen cellular contexts across cell lines.

Junwei Sun, Yuxun He, Ouyang Zhu et al. · 0 citations

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