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Review Open access Aug 2026

Gut microbiota in poultry: Roles in nutrition, metabolism and production performance.

The gut microbiota plays an important role in nutrient utilization, intestinal homeostasis, immune regulation, and production performance in poultry. Its composition and functional activity are shaped by complex interactions among host species, developmental stage, intestinal segment, diet, genetic background, and rearing environment. This review summarizes current knowledge of the poultry gut microbiota, with particular emphasis on its roles in nutrition, metabolism, and production performance. We first examine microbial composition and spatial distribution across major poultry species, including broiler chickens, laying hens, ducks, geese, and turkeys, and discuss the factors contributing to interspecies and interstudy variation. We then evaluate how dietary components, including fiber, protein, amino acids, and lipids, modulate microbial communities and metabolic pathways. Particular attention is given to microbial fermentation, short-chain fatty acid production, microbial nitrogen metabolism, bile acid transformation, and host-microbiota signaling, which collectively influence nutrient utilization, intestinal barrier function, immune homeostasis, and metabolic regulation. The potential of microbiota-targeted strategies, including probiotics, prebiotics, synbiotics, dietary fiber manipulation, reduced-protein diets, and emerging microbial interventions, to improve feed efficiency, growth performance, carcass characteristics, meat quality, and resilience to environmental stress is also discussed. In addition, the implications of gut microbiota regulation for nitrogen utilization, ammonia emissions, animal welfare, and antibiotic-free production are considered. Despite substantial progress, the translation of microbiome research into practical applications remains limited by inconsistent experimental designs, methodological heterogeneity, insufficient functional validation, and a lack of causal evidence. Integrating multi-omics approaches with controlled intervention studies and standardized experimental frameworks will be essential for defining causal microbiota-host interactions and developing precision microbiota-based strategies. Overall, a functional understanding of the diet-microbiota-host axis may provide new opportunities to improve poultry productivity, health, and sustainability.

Zhu-Ting Chen, Cheng Xin, Shuang Zhang et al. · 0 citations
Jul 2026

In vivo absorption in mice and fecal fermentation by human gut microbiota: impacts on gut microbiota and short-chain fatty acids production.

BACKGROUND Current understanding of the biological activities and metabolism of raffinose remains limited. This study aimed to elucidate its digestive behavior and anti-allergic potential by integrating fluorescence imaging in mice, in vitro digestion simulation, human fecal fermentation, and RBL-2H3 cells detection. RESULTS The results showed that following oral gavage in mice, raffinose was primarily distributed in the gastrointestinal tract and reached the colon within 2-6 h. In addition, raffinose was hardly degraded during in vitro simulated gastric and intestinal digestion. Analysis of human fecal microbiota demonstrated that microbial richness and diversity were lower in food-allergic individuals than in healthy individuals. In the in vitro fermentation system using human fecal samples, raffinose supplementation increased short-chain fatty acid concentrations in the group involving fecal fermentation from healthy volunteers with raffinose. Furthermore, raffinose inhibited the growth of Escherichia-Shigella and Weissella. In the RBL-2H3 cell degranulation model, raffinose promoted cell proliferation, suppressed degranulation, and reduced the release of β-hexosaminidase and histamine, demonstrating its anti-degranulation capacity. CONCLUSION Our results verify that raffinose is indigestible in the upper gastrointestinal tract using a mouse model. It modulates gut microbiota and short-chain fatty acids in in vitro human fecal fermentation systems and produces anti-allergic effects in cell models. These findings provide a foundation for expanding the applications of raffinose in deep processing as a value-added functional product. © 2026 Society of Chemical Industry.

Jing Ma, Jian Yu, Zhen Liu et al. · 0 citations

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