SoftGene: Protein Language Model-Enhanced Soft Prompting for Interpretable Gene Set Annotation
Gene set analysis is a cornerstone of functional genomics, yet it remains labor-intensive and heavily dependent on manual curation and expert biological interpretation. While Large Language Models (LLMs) have emerged as powerful tools for genomic reasoning and annotation, most existing approaches rely on symbolic gene...
D. Ross, Arya Hadizadeh Moghaddam, Dong-Jie Wang et al.
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