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Xavier F. Cadet

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Review Open access Aug 2026

SilkRoute: A Descriptor-Driven Framework for Reproducible Multi-Source Biomolecular Data Acquisition

Background Biomolecular dataset construction often requires coordinated retrieval from heterogeneous repositories, identifier mapping, cross-reference enrichment, source-specific parsing, and provenance recording. These operations are frequently implemented through project-specific scripts, making acquisition procedure...

Diego Fernández, Julián García-Vinuesa, Diego Alvarez-Saravia et al. · 0 citations
Preprint Sep 2026

BlueSTAR: Tiered Agentic Architecture for Autonomous Cyber Defense

BlueSTAR is presented, a tiered agentic architecture for autonomous cyber defense in enterprise IT/OT networks that retains the fast containment of deterministic response for known threats while successfully defending against attacks requiring contextual and cross-cycle reasoning.

Simona Boboila, Xavier F. Cadet, Edward Koh et al. · 0 citations
Review Open access Aug 2026

Diffusion-Based Protein Structure Design: Geometric Modelling, Validation Strategies, and Thermodynamic Challenges

This review focuses on coordinate- and residue-frame-based diffusion approaches for generating protein structures, paying particular attention to geometric equivariance, conditioning strategies, all-atom modelling and interaction-aware design.

Wen-Ran Li, Xavier F. Cadet, David Medina-Ortiz et al. · 0 citations

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