Review
Open access
Aug 2026
Variant calling in non-model organisms with snpArcher.
A step-by-step protocol for snpArcher, a Snakemake-based workflow that takes raw sequencing reads and a reference genome as input and produces a filtered, joint-called VCF suitable for downstream population genomic analysis, is presented.
Cade Mirchandani, Abdelmajid Omarjee, Guillaume Achaz et al.
· Molecular biology and evolut... · 0 citations