Code, result files, derived integer-count tables and figures for a comparison of seven word lists used to estimate generative-AI-assisted writing, applied under identical rules to the English abstracts of 25 Japanese society journals and to PubMed (a random sample of 20,000 abstracts per year, 2010-2025, and the PubMed word counts released by Kobak et al., 2025). Includes the harvest scripts, the comparison word groups of both corpora, the PubMed comparison protocol as fixed before PubMed data from 2022 onward were analyzed, and a clean-room script (code/reproduce.py) that recomputes the reported quantities from the derived tables. No abstract text is redistributed. Version 1.8.0 accompanies the revision: two corrections to the construction of the submitted analysis, the PubMed comparison, and the revision's table and figure generators. Code under the MIT License; derived tables under CC0 (derived/DATA_LICENSE.txt). The deposit is uploaded as four zip files; extracting all four into the same folder gives the complete jstage_wordlists_v1.8.0 folder. Funded by Waseda University Grant for Special Research Projects (Tokutei Kadai), an internal scheme that assigns no external grant number, and MEXT Supporting Pioneering Research through AI for 1,000 Discovery challenges Program (SPReAD) Japan Grant Number JPMXP1726306059.
Tengfei Shao· Zenodo (CERN European Organi...· 0 citations
Code, result files, derived integer-count tables and figures for a comparison of seven word lists used to estimate generative-AI-assisted writing, applied under identical rules to the English abstracts of 25 Japanese society journals and to PubMed (a random sample of 20,000 abstracts per year, 2010-2025, and the PubMed word counts released by Kobak et al., 2025). Includes the harvest scripts, the comparison word groups of both corpora, the PubMed comparison protocol as fixed before PubMed data from 2022 onward were analyzed, and a clean-room script (code/reproduce.py) that recomputes the reported quantities from the derived tables. No abstract text is redistributed. Version 1.8.0 accompanies the revision: two corrections to the construction of the submitted analysis, the PubMed comparison, and the revision's table and figure generators. Code under the MIT License; derived tables under CC0 (derived/DATA_LICENSE.txt). The deposit is uploaded as four zip files; extracting all four into the same folder gives the complete jstage_wordlists_v1.8.0 folder. Funded by Waseda University Grant for Special Research Projects (Tokutei Kadai), an internal scheme that assigns no external grant number, and MEXT Supporting Pioneering Research through AI for 1,000 Discovery challenges Program (SPReAD) Japan Grant Number JPMXP1726306059.
Tengfei Shao· Zenodo (CERN European Organi...· 0 citations
This package reproduces the analyses, cached null ensembles and figures of "Auditing bipartite motif interpretations: a worked example with conservation checks and open-path decomposition" (Tengfei Shao, submitted to PeerJ Computer Science, 2026). It contains the typed bipartite motif counting operator and three independent cross-checks of it; the degree-preserving null pipeline that draws the record and robustness ensembles used throughout the note; the chain-length convergence run and its second-seed replicate; the leave-one-tourist-out, drop-two-most-active and edge-rating-threshold robustness re-runs; the single number source (numbers.csv) with the reconciliation scripts; and the eight figure scripts with their rendered output. MANIFEST.json carries the SHA-256 and byte count of every file. The tourism rating matrix that every script operates on (17 tourists x 80 sightseeing sites) is openly available (CC BY 4.0) at 10.5281/zenodo.22287945 and is not bundled here; data/README_DATA.md explains how to obtain it and verify it by MD5 hash. Every script accepts a TOURISM_CSV environment variable so the file can be placed anywhere. The null draws depend on attrimotif 1.1.1 (10.5281/zenodo.22259239); every script accepts an ATTRIMOTIF_SRC environment variable pointing at a source checkout or falls back to an installed package. This package covers only the note's own analyses. It is not a re-release of the predecessor framework package (10.5281/zenodo.22287908, version 5, corrected proposal-counted sampler), which the note applies to a single worked example. Run order, expected key outputs, seeds and environment are given in README.md. Licence: MIT for code; CC BY 4.0 for result tables and figures. Version 1.2 (2026-09-04). Data access notes corrected to the open record; TOURISM_CSV honoured by every script; README table and figure mappings corrected; pinned requirements added; licence scope stated (the record licence field is MIT, which covers the code; result tables and figure renders are additionally released under CC BY 4.0 as stated in LICENSE and README); vacuous checkers removed. No analysis result changed. Funding: This work was supported by the Waseda University Grant for Special Research Projects. This work was supported by MEXT Supporting Pioneering Research through AI for 1,000 Discovery challenges Program (SPReAD) Japan Grant Number JPMXP1726306059.
Tengfei Shao· Zenodo (CERN European Organi...· 0 citations
This package reproduces the analyses, cached null ensembles and figures of "Auditing bipartite motif interpretations: a worked example with conservation checks and open-path decomposition" (Tengfei Shao, submitted to PeerJ Computer Science, 2026). It contains the typed bipartite motif counting operator and three independent cross-checks of it; the degree-preserving null pipeline that draws the record and robustness ensembles used throughout the note; the chain-length convergence run and its second-seed replicate; the leave-one-tourist-out, drop-two-most-active and edge-rating-threshold robustness re-runs; the single number source (numbers.csv) with the reconciliation scripts; and the eight figure scripts with their rendered output. MANIFEST.json carries the SHA-256 and byte count of every file. The tourism rating matrix that every script operates on (17 tourists x 80 sightseeing sites) is openly available (CC BY 4.0) at 10.5281/zenodo.22299150 and is not bundled here; data/README_DATA.md explains how to obtain it and verify it by MD5 hash. Every script accepts a TOURISM_CSV environment variable so the file can be placed anywhere. The null draws depend on attrimotif 1.1.1 (10.5281/zenodo.22259239); every script accepts an ATTRIMOTIF_SRC environment variable pointing at a source checkout or falls back to an installed package. This package covers only the note's own analyses. It is not a re-release of the predecessor framework package (10.5281/zenodo.22287908, version 5, corrected proposal-counted sampler), which the note applies to a single worked example. Run order, expected key outputs, seeds and environment are given in README.md. Licence: MIT for code; CC BY 4.0 for result tables and figures. Version 1.6 (2026-09-05). Table numbers in README.md remapped to the sequential Tables 1 to 10 used by the manuscript. The manuscript renumbered its tables on 2026-09-05, from the earlier 1a/1b/1c/2/3/4a-4d/5 scheme, so that the submission portal's own table slots match the captions; the mapping is 1a to 1, 1b to 2, 1c to 3, 2 to 4, 3 to 5, 5 to 6, 4a to 7, 4b to 8, 4c to 9, 4d to 10. No code, data, figure or result changed between 1.5 and 1.6. Version history: 1.5 tourism-matrix references updated to the current record version (10.5281/zenodo.22299150) and the Figure 5 subtitle recalibrated ("extreme relative to the sampled null" instead of "real under the null"); 1.4 aligned version labels and the cross-check header and removed the regression-based conditional z from Figure 5; 1.3 README mapping statement; 1.2 open-data notes, TOURISM_CSV, mappings, pinned requirements, licence scope. No analysis result changed in any version. Funding: This work was supported by the Waseda University Grant for Special Research Projects. This work was supported by MEXT Supporting Pioneering Research through AI for 1,000 Discovery challenges Program (SPReAD) Japan Grant Number JPMXP1726306059.
Tengfei Shao· Zenodo (CERN European Organi...· 0 citations
This package reproduces the analyses, cached null ensembles and figures of "Auditing bipartite motif interpretations: a worked example with conservation checks and open-path decomposition" (Tengfei Shao, submitted to PeerJ Computer Science, 2026). It contains the typed bipartite motif counting operator and three independent cross-checks of it; the degree-preserving null pipeline that draws the record and robustness ensembles used throughout the note; the chain-length convergence run and its second-seed replicate; the leave-one-tourist-out, drop-two-most-active and edge-rating-threshold robustness re-runs; the single number source (numbers.csv) with the reconciliation scripts; and the eight figure scripts with their rendered output. MANIFEST.json carries the SHA-256 and byte count of every file. The tourism rating matrix that every script operates on (17 tourists x 80 sightseeing sites) is openly available (CC BY 4.0) at 10.5281/zenodo.22299150 and is not bundled here; data/README_DATA.md explains how to obtain it and verify it by MD5 hash. Every script accepts a TOURISM_CSV environment variable so the file can be placed anywhere. The null draws depend on attrimotif 1.1.1 (10.5281/zenodo.22259239); every script accepts an ATTRIMOTIF_SRC environment variable pointing at a source checkout or falls back to an installed package. This package covers only the note's own analyses. It is not a re-release of the predecessor framework package (10.5281/zenodo.22287908, version 5, corrected proposal-counted sampler), which the note applies to a single worked example. Run order, expected key outputs, seeds and environment are given in README.md. Licence: MIT for code; CC BY 4.0 for result tables and figures. Version 1.6 (2026-09-05). Table numbers in README.md remapped to the sequential Tables 1 to 10 used by the manuscript. The manuscript renumbered its tables on 2026-09-05, from the earlier 1a/1b/1c/2/3/4a-4d/5 scheme, so that the submission portal's own table slots match the captions; the mapping is 1a to 1, 1b to 2, 1c to 3, 2 to 4, 3 to 5, 5 to 6, 4a to 7, 4b to 8, 4c to 9, 4d to 10. No code, data, figure or result changed between 1.5 and 1.6. Version history: 1.5 tourism-matrix references updated to the current record version (10.5281/zenodo.22299150) and the Figure 5 subtitle recalibrated ("extreme relative to the sampled null" instead of "real under the null"); 1.4 aligned version labels and the cross-check header and removed the regression-based conditional z from Figure 5; 1.3 README mapping statement; 1.2 open-data notes, TOURISM_CSV, mappings, pinned requirements, licence scope. No analysis result changed in any version. Funding: This work was supported by the Waseda University Grant for Special Research Projects. This work was supported by MEXT Supporting Pioneering Research through AI for 1,000 Discovery challenges Program (SPReAD) Japan Grant Number JPMXP1726306059.
Tengfei Shao· Zenodo (CERN European Organi...· 0 citations
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