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Author

T. de Oliveira

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Open access Oct 2026

Spatiotemporal disease suitability prediction for Oropouche virus and the role of vectors across the Americas.

The resulting suitability model identifies high transmission risk areas in Central and South America, and reveals that environmental suitability patterns align with seasonal fluctuations in case numbers, with peaks in Amazonian states at the beginning of the year and an expansion into non-Amazonian regions later in the...

J. Poongavanan, Marcel Dunaiski, Graeme Dor et al. · 0 citations
Review Open access Aug 2026

Wastewater Metagenomic Surveillance Reveals Socioeconomic Patterns of Pathogen Diversity and Antimicrobial Resistance in Nairobi, Kenya

Background: Wastewater and Environmental Surveillance (WES) has become a useful public health tool as an early-warning system revealing emergence/re-emergence of pathogenic diseases and spread of antimicrobial resistance (AMR). We characterized the taxonomic composition, relative abundance, and antibiotic resistance ge...

Bernard Mware, Gilbert Kibet-Rono, K. Mwangi et al. · 0 citations
Open access Aug 2026

Anniemap: Vector Search for Viral Short Read Alignment

By measuring vector similarity rather than relying on long exact seed matches, Anniemap provides greater robustness to sequencing errors and genomic mutations, particularly advantageous for viral genomes, where substantial sequence divergence is common.

D. J. van Zyl, H. Tegally, C. Baxter et al. · 0 citations

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