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Author

Shiying Li

3 papers indexed here

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Preprint Aug 2026

A Unified Geometric Framework for Developmental Analysis of Spatial Transcriptomic Data

This work introduces a geometric framework for analyzing the spatiotemporal evolution of gene expression networks through embeddings in Gromov--Wasserstein (GW) space and demonstrates that hypernetwork representations successfully record salient biological changes across time.

M. Oliver, K. Hohmeier, Tuyến Trần et al. · 0 citations
Preprint Aug 2026

Wasserstein Mahalanobis Distances for Recovering Latent Geometry

The proposed Wasserstein Mahalanobis distance approximates the classical Mahalanobis distance between the transformed latent means and holds up to controlled higher-order error terms for general smooth transformations.

Chuxiang Wang, Shi-Ying Li, Caroline Moosmüller · 0 citations
Review Open access Aug 2026

Histone modifications: mechanisms, metabolic regulation, and therapeutic targeting in cancer

This review comprehensively summarizes the multifaceted roles of major histone modifications, including acetylation, methylation, ubiquitination, phosphorylation, and emerging metabolism-linked acylations, in governing critical DNA-templated processes such as replication, transcription, and the DNA damage response.

Ling-Li Wang, Shi-Ying Li, Xiao-Yan Hu et al. · 0 citations

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