Open access
Dec 2024
gaftools: a toolkit for analyzing and manipulating pangenome alignments
Gaftools enables users to index and sort alignments, with graph ordering serving as a necessary step for the sorting process, and allows users to view subsets of alignments and perform realignment using the wavefront alignment algorithm, among other useful features.
Samarendra Pani, Fawaz Dabbaghie, T. Marschall et al.
· bioRxiv · 8 citations