capripoxvirus-pangenome
Reproducible Nextflow DSL2 pipeline accompanying the manuscript "Pangenomic Evaluation of Host Adaptation and Recombination-Mediated Emergence in Capripoxviruses". Full workflow from read QC through the polarised McDonald-Kreitman test 13 process modules, 5 subworkflows, conda and container profiles, SLURM config Versi...