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Namkyeong Lee

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#artificial intelligence Preprint Oct 2026

AutoSciBench: Autonomous Benchmark Generation for Evaluating Scientific Agents

As agents rapidly evolve, existing benchmarks can become saturated, limiting their ability to distinguish capabilities and reveal remaining failure modes. Particularly in scientific domains, constructing and updating benchmarks requires substantial time, labor, and domain expertise, making it difficult to keep evaluati...

Dongki Kim, Namkyeong Lee, Surag Nair et al. · 0 citations
#artificial intelligence Preprint Sep 2026

scTrilemma: Balancing Identity, Invariance, and Fidelity in Single-Cell Representation Learning

Single-cell RNA-seq representation learning is fundamentally label-free: cell identities, states, and contexts are not fixed training targets, so what constitutes signal or nuisance is analysis-dependent. A single representation must therefore preserve biological identity and state, remain robust to nuisance context, a...

Yunhak Oh, Yoonho Lee, Junseok Lee et al. · 0 citations
#artificial intelligence Preprint Sep 2026

Biology-in-the-loop: Amortized Adaptive Hit Discovery in CRISPR Screens

Many biological discovery problems require experiments to be selected sequentially under constrained budgets. CRISPR screening is a prominent example, as exhaustive perturbation testing is often infeasible and candidate perturbations must instead be prioritized over multiple experimental rounds. Despite the importance...

Carl N. Edwards, E. De Brouwer, Xiner Li et al. · 0 citations
Book Open access Aug 2026

Learning Probabilistic Compositional Representation of Crystalline Materials

Machine learning (ML) has seen promising developments in materials science, yet its efficacy largely depends on detailed crystal structural data, which are often complex and hard to obtain, limiting their applicability in real-world material synthesis processes. An alternative, using compositional descriptors, offers a...

Namkyeong Lee, Heewoong Noh, Gyoung S. Na et al. · 0 citations
Book Open access Aug 2026

Learning Probabilistic Compositional Representation of Crystalline Materials

Machine learning (ML) has seen promising developments in materials science, yet its efficacy largely depends on detailed crystal structural data, which are often complex and hard to obtain, limiting their applicability in real-world material synthesis processes. An alternative, using compositional descriptors, offers a...

Namkyeong Lee, Heewoong Noh, Gyoung S. Na et al. · 0 citations

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