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Sponsored Artificial Intelligence: A Modern Approach, Global Edition Artificial Intelligence: A Modern Approach, Global Edition

Author

Melih Yilmaz

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Open access Oct 2026

Pretrained spectrum representations for diverse tandem mass spectrometry proteomics tasks.

Mass spectrometry is the dominant technology in the field of proteomics, enabling high-throughput analysis of the protein content of complex biological samples. Due to the complexity of the instrumentation and resulting data, sophisticated computational methods are required for the processing and interpretation of acqu...

Justin A. Sanders, Melih Yilmaz, Jacob H. Russell et al. · 0 citations
Open access Jul 2026

A systematic evaluation framework for universal antibody-antigen binding affinity prediction and candidate recommendation

This work proposes MochiBind, a sequence-only pairwise binding affinity predictor, and benchmark it against structure-derived baselines such as Boltz-2, GeoDock, and Graphinity, suggesting that sequence-based approaches can match or surpass structure-based models in generalization.

Yunrui Li, Yue Zhao, K. Sonmez et al. · 0 citations

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