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Author

Matt Pennell

2 papers indexed here

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Open access Sep 2026

Gene conversion facilitates rapid evolution of inversions across avian immunoglobulin loci

This work shows that avian IGH loci display a striking, previously unreported architecture of recurrent inverted duplications that generate direct and inverted copies of the same repeat unit, found in no other vertebrate lineage, and proposes a model in which these inversions are actively maintained.

Katalin Voss, Daniel Hardesty, A. Zamyatin et al. · 0 citations
Open access Aug 2026

PlantCAD2: A DNA foundation model for interpreting genomes across flowering plants

Summary Flowering plants (angiosperms) exhibit extraordinary species diversity, ∼200-fold variation in genome size, and relatively compact coding regions, presenting both a unique challenge and opportunity for DNA language models. Here, we introduce PlantCAD2, an extended-context, plant-specific DNA language model with...

Jing-Jing Zhai, Aaron Gokaslan, Sheng-Kai Hsu et al. · 1 citation

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