Author

Lina Abou-Abbas

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#artificial intelligence Preprint Sep 2026

Drug-Target Interaction Prediction via Hierarchical Sequential Cross-Attention over Chemical and Protein Language Models

This paper proposes a sequence-only DTI prediction architecture that combines two pre-trained language models, ChemBERTa for drug SMILES strings and ESM-2 for protein amino acid sequences, with a hierarchical interaction module, and implements a sequential bidirectional cross-attention mechanism inspired by the induced...

Khadidja Henni, Hamza Abdelali, Abdelkrim Aries et al. · 0 citations

#artificial intelligence Preprint Sep 2026

BERT4DTI : BERT-based Model for Predicting Drug-Protein Interactions

BERT4DTI is presented, which encodes SMILES strings with ChemBERTa and amino-acid sequences with ProtBERT, applies bidirectional mutual attention between token-level representations, and classifies the resulting interaction features using convolutional layers and a multilayer perceptron.

Thanina Hamitouch, Khadidja Henni, Abdelkrim Arie et al. · 0 citations