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Author

Jingjing Qian

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Oct 2026

Deciphering Cellular and Spatial Regulatory Identities from Sparse Chromatin Accessibility Landscapes.

Chromatin accessibility profiling provides a powerful view of regulatory landscapes across heterogeneous biological systems, enabling the investigation of cell-state diversity and spatially organized regulatory programs. However, deciphering meaningful regulatory identities from sparse and noisy accessibility landscape...

Yun-He Wang, Song-Yu Guo, Jing-Jing Qian et al. · 0 citations
Open access Aug 2026

DNAreader: accurate prediction of DNA-binding residues in structured and disordered proteins using transformers and contrastive learning

This work introduces DNAreader, the first predictor specifically designed to predict DBRs in the structured and disordered sequence regions, and develops the DNAreaderDBIDR module, which accurately predicts DNA-binding IDRs, providing flexibility to identify DBRs within IDRs or to predict entire disordered DNA-binding...

Jian Zhang, Sushmita Basu, Jingjing Qian et al. · 0 citations

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