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Open access Sep 2026

Unlocking the full potential of spatial omics in plants: practical challenges, solutions, and a path forward

A practical, solution-oriented synthesis of current bottlenecks across experimental and computational pipelines is provided, emerging strategies to overcome these limitations are highlighted, and a roadmap for community-driven protocol sharing, benchmarking, and integration across spatial and multi-omics modalities is...

Min-Yao Jhu, Max Minne, Zi-Liang Luo et al. · 0 citations
Jul 2026

Sequence-based modeling of plant epigenomes reveals cell-type-specific cis-regulatory grammar

PEAgent provides a foundational resource for decoding cell-type-specific plant cis-regulatory logic and interpreting noncoding variation in plants, and distinguishes grass-conserved from lineage-specific regulatory sequences better than sequence conservation scores alone.

Jie Yao, Jiaqi Li, Xuan Zhang et al. · 0 citations

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