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Jacob L. Steenwyk

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Open access Jul 2026

A geometric atlas of how ESM3 organizes modalities across depth

ESM3 is a multimodal protein language model that ingests a protein through several channels at once, including amino-acid sequence, three-dimensional structure, secondary structure (SS8), solvent accessibility (SASA), and discrete functional annotations, summing their embeddings into a single residual stream.

Jacob L. Steenwyk · 0 citations

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