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J. Pinhassi

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Open access Sep 2026

Comparable temperatures but different microbiomes: long-term time series exposes seasonally divergent Baltic Sea prokaryotic communities

Marine microbiomes exhibit seasonal dynamics in many ocean regions. While we can characterize the biodiversity and composition of ocean microbiomes, we lack a systematic understanding of how environmental drivers shape the seasonal succession of marine microbes. To leverage the pronounced temporal changes in growth con...

Carina Bunse, H. Farnelid, E. Lindehoff et al. · 0 citations
Review Open access Jul 2026

nf-core/magmap: Map metatranscriptomes to large collections of genomes

The nf-core/magmap pipeline is presented, which provides a reproducible, easy-to-access, and well-documented workflow for selecting reference genomes, mapping to them, and quantifying features.

Danilo Di Leo, E. Nilsson, George Westmeijer et al. · 0 citations

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