Author

Ikki Yasuda

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Open access Aug 2026

Coarse-grained models for simulations of double-stranded nucleic acids for mixed protein–nucleic acid condensates

A set of coarse-grained two-bead-per-nucleotide models for simulations of double-stranded RNA and DNA in the CALVADOS framework are presented and it is envisioned that the CALVADOS models for double-stranded RNA and DNA will be useful for studying co-condensates of proteins and structured nucleic acids.

Ikki Yasuda, G. Tesei, Eiji Yamamoto et al. · bioRxiv · 0 citations