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Emily Stetson

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Open access Jul 2026

Conformational landscape of 2-aminopurine-substituted RNA oligonucleotides from machine-learning-driven enhanced sampling

The results show that while 2AP substitution does not significantly alter stacking propensity, it substantially modulates the free energy landscape, leading to a redistribution of populations among stacking modes and supporting the hypothesis that base stacking quenches 2AP fluorescence and promotes dark state formation.

Revanth Elangovan, Emily Stetson, J. Widom et al. · 0 citations

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