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Author

Elisa Ficarra

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#small language model Open access Sep 2026

Self-Architecting Protein Transformers: An Empirical Study

This work asks whether a self-architecting transformer, which grows its own width and depth from quantitative signals derived from the attention matrices, can extract competitive protein representations from a single reference proteome.

G. Cirrincione, E. Ficarra, Marta Lovino · 0 citations
Open access Jul 2026

Multi-modal data integration reveals functionally credible predictive biomarkers in ovarian cancer.

An integrated whole-genome and transcriptome workflow is developed to systematically distinguish functionally credible, predictive driver aberrations from non-functional alterations across all classes of genomic events in ovarian high-grade serous carcinoma.

T. Muranen, A. Hainari, D. Afenteva et al. · 0 citations

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