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E. Thiede

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Cryo-EM as a Stochastic Inverse Problem

This work forms cryo-EM reconstruction as a stochastic inverse problem (SIP) over probability measures, where the observed images are modeled as the push-forward of an unknown distribution over molecular structures via a random forward operator.

D. Espinosa, E. Thiede, Yunan Yang · 1 citation
Preprint Jul 2026

Mapping recrystallization trajectories in GaAs using latent space diffraction analysis

Recrystallization in disordered solids proceeds through a sequence of local structural rearrangements that are difficult to resolve using conventional diffraction analysis. In amorphous and partially ordered materials, subtle variations in diffuse scattering, short-range order, and defect-mediated symmetry emergence en...

E. Kennedy, K. Je, E. Thiede · 0 citations
#small language model Open access Aug 2026

Multi-Peptide Prompting Enables In-Context Learning in Protein Language Models

It is shown that single-sequence PLMs can perform in-context peptide learning without gradient updates, task-specific retraining, or architectural modification, and MPEP conditioning is established as a lightweight strategy for low-data peptide classification.

Joshua Almonte, M. Vu, Andrew Ahn et al. · 0 citations

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