Review
Open access
Aug 2026
Deep Learning for Deciphering the Plant Cis-Regulatory Code
This review compares convolutional, Transformer-based and graph architectures used to represent local sequence features, chromatin state and three-dimensional genome organisation to their applications to transcription-factor binding, chromatin accessibility, gene expression, non-coding variant prioritisation and regulatory-sequence design.
Zhi-Meng Zhao, Si-Xuan Huang, Shi-Long Zhang et al.
· Plants · 0 citations