Author

Cristal Zúñiga

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Review Open access Oct 2026

Metabolic modeling: the link between AI and multi-omics data to accelerate the discovery of antibiotic-resistant traits in ESKAPE pathogens

ABSTRACT The development of predictive understanding of bacterial resistance to antibiotics is one of the greatest challenges of modern medicine. Genome-scale metabolic models (GEMs) are mathematical representations of the metabolic network of a given organism assembled from genomic data that predict cellular activity...

N. Muzahid, Arjun Patel, Mason Raymond et al. · Infection and Immunity · 0 citations

Open access Jul 2026

Predicting Strain-Specific Metabolic Capabilities in the Genus Pseudomonas with a Flux-to-AI Approach Reveals Hidden Cell Envelope Properties

Rec reconstructed genome-scale metabolic models of 44 Pseudomonas strains from various environments and investigated their capabilities to metabolize different carbon sources and metabolic intermediaries, demonstrating how GEM-predicted capabilities can differentiate between strains and that high metabolic versatility...

C. Fócil-Espinosa, Christopher Dalldorf, Diego Martinez et al. · Computational and Structural... · 0 citations